RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 TRPV3Q8NET8 790 aa12.9□□□□□ -0.34
HOXC6-203ENST00000504315 TTLQ8NG68 377 aa12.9□□□□□ -0.34
HOXC6-203ENST00000504315 OR5T3Q8NGG3 340 aa12.9□□□□□ -0.34
HOXC6-203ENST00000504315 BRIX1Q8TDN6 353 aaKnown RBP12.9□□□□□ -0.34
HOXC6-203ENST00000504315 UTP15Q8TED0 518 aaKnown RBP12.9□□□□□ -0.34
HOXC6-203ENST00000504315 METTL21AQ8WXB1 218 aa12.9□□□□□ -0.34
HOXC6-203ENST00000504315 SEC16BQ96JE7 1060 aa12.9□□□□□ -0.34
HOXC6-203ENST00000504315 SLC29A3Q9BZD2 475 aa12.9□□□□□ -0.34
HOXC6-203ENST00000504315 UNKQ9C0B0 810 aaKnown RBP12.9□□□□□ -0.34
HOXC6-203ENST00000504315 AICDAQ9GZX7 198 aa12.9□□□□□ -0.34
HOXC6-203ENST00000504315 ASF1BQ9NVP2 202 aa12.9□□□□□ -0.34
HOXC6-203ENST00000504315 C19orf25Q9UFG5 118 aaPredicted RBP12.9□□□□□ -0.34
HOXC6-203ENST00000504315 NAV2Q8IVL1 2488 aa12.9□□□□□ -0.34
HOXC6-203ENST00000504315 EML6Q6ZMW3 1958 aa12.9□□□□□ -0.34
HOXC6-203ENST00000504315 PCNX1Q96RV3 2341 aa12.9□□□□□ -0.34
HOXC6-203ENST00000504315 DOPEY1Q5JWR5 2465 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 URADA6NGE7 173 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 FAM155BO75949 473 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 URI1O94763 535 aaPredicted RBP12.89□□□□□ -0.35
HOXC6-203ENST00000504315 CELA2AP08217 269 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 ZNF888P0CJ79 500 aaPredicted RBP12.89□□□□□ -0.35
HOXC6-203ENST00000504315 C1GALT1C1LP0DN25 315 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 ITGAMP11215 1152 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 E2F2Q14209 437 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 ZNF169Q14929 603 aaPredicted RBP12.89□□□□□ -0.35
HOXC6-203ENST00000504315 EFTUD2Q15029 972 aaKnown RBP eCLIP12.89□□□□□ -0.35
HOXC6-203ENST00000504315 TLR1Q15399 786 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 MINDY4Q4G0A6 757 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 DEFB134Q4QY38 66 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 PLAG1Q6DJT9 500 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 SULT1C3Q6IMI6 304 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 RPUSD3Q6P087 351 aaKnown RBP12.89□□□□□ -0.35
HOXC6-203ENST00000504315 CCDC91Q7Z6B0 441 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 ANKRD37Q7Z713 158 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 GPSM1Q86YR5 675 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.89□□□□□ -0.35
HOXC6-203ENST00000504315 SPATA6LQ8N4H0 392 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 MMGT1Q8N4V1 131 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 HAS2Q92819 552 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 C19orf60Q96EN9 201 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 WDR34Q96EX3 536 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 PEX11GQ96HA9 241 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 CAPS2Q9BXY5 557 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 RNF32Q9H0A6 362 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 EHD1Q9H4M9 534 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 NT5DC2Q9H857 520 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 CNOT10Q9H9A5 744 aaKnown RBP12.89□□□□□ -0.35
HOXC6-203ENST00000504315 DNAJC11Q9NVH1 559 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 WWOXQ9NZC7 414 aa12.89□□□□□ -0.35
HOXC6-203ENST00000504315 PTBP2Q9UKA9 531 aaKnown RBP12.89□□□□□ -0.35
HOXC6-203ENST00000504315 CCDC189A1A4V9 331 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 HMX2A2RU54 273 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 OR2W5A6NFC9 320 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 ZNF860A6NHJ4 632 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 NCF1BA6NI72 391 aaPredicted RBP12.88□□□□□ -0.35
HOXC6-203ENST00000504315 NCF1CA8MVU1 366 aaPredicted RBP12.88□□□□□ -0.35
HOXC6-203ENST00000504315 MAGEB17A8MXT2 336 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 C4orf51C9J302 202 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 CHST10O43529 356 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 PRAMEF4O60810 478 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 CBX6O95503 412 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 FHP07954 510 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 NCF1P14598 390 aaPredicted RBP12.88□□□□□ -0.35
HOXC6-203ENST00000504315 KCNC1P48547 511 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 DLG1Q12959 904 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 SLBPQ14493 270 aaKnown RBP eCLIP12.88□□□□□ -0.35
HOXC6-203ENST00000504315 PRAMEF9Q5VWM5 478 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 H3F3CQ6NXT2 135 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 QSOX2Q6ZRP7 698 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 LINC00696Q6ZRV3 163 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 CMC1Q7Z7K0 106 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 ISCA2Q86U28 154 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 CISD2Q8N5K1 135 aaKnown RBP12.88□□□□□ -0.35
HOXC6-203ENST00000504315 DNAJB14Q8TBM8 379 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 TBC1D20Q96BZ9 403 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 ATOH8Q96SQ7 321 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 FUT8Q9BYC5 575 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 IGSF5Q9NSI5 407 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 PTGFRNQ9P2B2 879 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 NTNG1Q9Y2I2 539 aa12.88□□□□□ -0.35
HOXC6-203ENST00000504315 IGHV3-20A0A0C4DH32 117 aa12.87□□□□□ -0.35
HOXC6-203ENST00000504315 KERAO60938 352 aa12.87□□□□□ -0.35
HOXC6-203ENST00000504315 DNAJB6O75190 326 aa12.87□□□□□ -0.35
HOXC6-203ENST00000504315 H2AFYO75367 372 aaKnown RBP12.87□□□□□ -0.35
HOXC6-203ENST00000504315 CLEC3AO75596 197 aa12.87□□□□□ -0.35
HOXC6-203ENST00000504315 STK16O75716 305 aa12.87□□□□□ -0.35
HOXC6-203ENST00000504315 CDC123O75794 336 aaPredicted RBP12.87□□□□□ -0.35
HOXC6-203ENST00000504315 SEC24DO94855 1032 aaPredicted RBP12.87□□□□□ -0.35
HOXC6-203ENST00000504315 TBX6O95947 436 aaPredicted RBP12.87□□□□□ -0.35
HOXC6-203ENST00000504315 B3GALT4O96024 378 aa12.87□□□□□ -0.35
HOXC6-203ENST00000504315 TUBB4AP04350 444 aa12.87□□□□□ -0.35
HOXC6-203ENST00000504315 SERPIND1P05546 499 aa12.87□□□□□ -0.35
HOXC6-203ENST00000504315 LTA4HP09960 611 aaKnown RBP12.87□□□□□ -0.35
HOXC6-203ENST00000504315 EPORP19235 508 aa12.87□□□□□ -0.35
HOXC6-203ENST00000504315 JAK1P23458 1154 aa12.87□□□□□ -0.35
HOXC6-203ENST00000504315 CRABP2P29373 138 aa12.87□□□□□ -0.35
HOXC6-203ENST00000504315 GMPRP36959 345 aa12.87□□□□□ -0.35
HOXC6-203ENST00000504315 GLRBP48167 497 aa12.87□□□□□ -0.35
HOXC6-203ENST00000504315 HSPA7P48741 367 aa12.87□□□□□ -0.35
HOXC6-203ENST00000504315 TNFSF10P50591 281 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms