RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 SETBP1Q9Y6X0 1596 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 AGPSO00116 658 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 ARPC5O15511 151 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 IGHEP01854 428 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 PRF1P14222 555 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 OXTRP30559 389 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 SRP9P49458 86 aaKnown RBP6.06□□□□□ -1.44
CLCN3-204ENST00000504131 PRELPP51888 382 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 MTAPQ13126 283 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 KCNJ11Q14654 390 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 DNM1P34Q6PK57 102 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 G2E3Q7L622 706 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 TMED4Q7Z7H5 227 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 MRPL10Q7Z7H8 261 aaKnown RBP6.06□□□□□ -1.44
CLCN3-204ENST00000504131 GPALPP1Q8IXQ4 340 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 ADGRF4Q8IZF3 695 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 NSMAFQ92636 917 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 FAM83DQ9H4H8 585 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 EBF1Q9UH73 591 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 MEIOCA2RUB1 952 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 UBE2Q2LH0YL09 131 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 SH2B2O14492 632 aaPredicted RBP6.06□□□□□ -1.44
CLCN3-204ENST00000504131 SLC22A5O76082 557 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 FTLP02792 175 aaPredicted RBP6.06□□□□□ -1.44
CLCN3-204ENST00000504131 C2P06681 752 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 OR10J4P0C629 311 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 CPN2P22792 545 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 IL1R2P27930 398 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 ANXA11P50995 505 aaKnown RBP6.06□□□□□ -1.44
CLCN3-204ENST00000504131 CLCNKBP51801 687 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 KLF10Q13118 480 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 VEZF1Q14119 521 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 IQCCQ4KMZ1 466 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 DESI1Q6ICB0 168 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF573Q86YE8 665 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 CLEC10AQ8IUN9 316 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 OR10W1Q8NGF6 305 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 ITFG1Q8TB96 612 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 HSFY1Q96LI6 401 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 CLMPQ9H6B4 373 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 SLC27A5Q9Y2P5 690 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 PTRH2Q9Y3E5 179 aaKnown RBP6.06□□□□□ -1.44
CLCN3-204ENST00000504131 ADAM18Q9Y3Q7 739 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 ADAMDEC1O15204 470 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 H2AFYO75367 372 aaKnown RBP6.06□□□□□ -1.44
CLCN3-204ENST00000504131 RP2O75695 350 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 G6PDP11413 515 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 ARNTP27540 789 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 AVPR2P30518 371 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 ACTBP60709 375 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 ACTG1P63261 375 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 GRB7Q14451 532 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 SMAD2Q15796 467 aaKnown RBP6.06□□□□□ -1.44
CLCN3-204ENST00000504131 SNAPC1Q16533 368 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 ODF4Q2M2E3 257 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 KCTD11Q693B1 232 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 RFWD3Q6PCD5 774 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 DCLRE1AQ6PJP8 1040 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 COMMD2Q86X83 199 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 IZUMO1Q8IYV9 350 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 DCPSQ96C86 337 aaKnown RBP6.06□□□□□ -1.44
CLCN3-204ENST00000504131 SLC35A5Q9BS91 424 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 ANKRD19PQ9H560 264 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF552Q9H707 407 aaPredicted RBP6.06□□□□□ -1.44
CLCN3-204ENST00000504131 SERTAD1Q9UHV2 236 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 SLC27A6Q9Y2P4 619 aa6.06□□□□□ -1.44
CLCN3-204ENST00000504131 C5orf58C9J3I9 102 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 GSC2O15499 205 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 H2AFB2P0C5Z0 115 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 GCGRP47871 477 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 EPHB3P54753 998 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 MLLT10P55197 1068 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 PKNOX1P55347 436 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 FKBP3Q00688 224 aaKnown RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 RGS1Q08116 209 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF844Q08AG5 666 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 CDH17Q12864 832 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 MRPL58Q14197 206 aaKnown RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 PRAMEF17Q5VTA0 474 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 OR5M10Q6IEU7 315 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 FAM131AQ6UXB0 335 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 PHACTR4Q8IZ21 702 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 OR13C3Q8NGS6 347 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 CPA5Q8WXQ8 436 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 RAB24Q969Q5 203 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 MRPS30Q9NP92 439 aaKnown RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 PRDM7Q9NQW5 492 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 BABAM1Q9NWV8 329 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 HSFX1Q9UBD0 423 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 LOC102724428A0A0B4J2F2 783 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 CD8B2A6NJW9 211 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 CLIC1O00299 241 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 PHOX2AO14813 284 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 TGM5O43548 720 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 SIGLEC6O43699 453 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 TPST1O60507 370 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF780AO75290 641 aaPredicted RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 IFNA2P01563 188 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 RPLP0P05388 317 aaKnown RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 MMP3P08254 477 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms