RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 FLNAP21333 2647 aaKnown RBP3.39□□□□□ -1.87
USP46-205ENST00000504078 IGLV3-16A0A075B6K0 115 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 IGLV3-12A0A075B6K2 115 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 LOC102723996A0A087X1L8 192 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 IGKV1-8A0A0C4DH67 115 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 MYOCOSA0A1B0GUC4 107 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 A0A1W2PPV9 198 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 SLC5A10A0PJK1 596 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 FITM1A5D6W6 292 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 SOWAHDA6NJG2 315 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 C2orf81A6NN90 581 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 USP27XA6NNY8 438 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 EEF1E1-BLOC1S5C9J1V9 151 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 H7C0C1 242 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 SGK494L7N484 410 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 EIF1AYO14602 144 aaKnown RBP3.39□□□□□ -1.87
USP46-205ENST00000504078 NDC80O14777 642 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 LIN7AO14910 233 aaPredicted RBP3.39□□□□□ -1.87
USP46-205ENST00000504078 EEF1E1O43324 174 aaKnown RBP3.39□□□□□ -1.87
USP46-205ENST00000504078 FOXS1O43638 330 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 CST8O60676 142 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 TRIM13O60858 407 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 LRATO95237 230 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 FTH1P02794 183 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 CYP1A2P05177 515 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 CELA3AP09093 270 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 CCDC172P0C7W6 258 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 GLI4P10075 376 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 CD9P21926 228 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 BMP5P22003 454 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 MSNP26038 577 aaKnown RBP3.39□□□□□ -1.87
USP46-205ENST00000504078 RBL1P28749 1068 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 HOXC12P31275 282 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 CCR7P32248 378 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 FOXN2P32314 431 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 KIR2DL3P43628 341 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 XCR1P46094 333 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 ATP5OP48047 213 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 CD151P48509 253 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 AGFG1P52594 562 aaKnown RBP3.39□□□□□ -1.87
USP46-205ENST00000504078 UBE2HP62256 183 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 NKX6-1P78426 367 aaPredicted RBP3.39□□□□□ -1.87
USP46-205ENST00000504078 MYL5Q02045 173 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 MPP3Q13368 585 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 SEMA3AQ14563 771 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 ABRAXAS2Q15018 415 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 PDK2Q15119 407 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 SLC14A2Q15849 920 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 MEP1AQ16819 746 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 KCTD19Q17RG1 926 aaPredicted RBP3.39□□□□□ -1.87
USP46-205ENST00000504078 PRTGQ2VWP7 1150 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 FLYWCH1Q4VC44 716 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 KRTCAP3Q53RY4 240 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 FIGNQ5HY92 759 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 ZC3H12BQ5HYM0 836 aaKnown RBP3.39□□□□□ -1.87
USP46-205ENST00000504078 TCTE1Q5JU00 501 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 ZDHHC20Q5W0Z9 365 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 PLAG1Q6DJT9 500 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 SLC25A25Q6KCM7 469 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 PRMT9Q6P2P2 845 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 LRRC8BQ6P9F7 803 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 ZNF449Q6P9G9 518 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 TMEM205Q6UW68 189 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 MAP7D3Q8IWC1 876 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 EID3Q8N140 333 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 SLC5A8Q8N695 610 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 NAXEQ8NCW5 288 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 OR5T3Q8NGG3 340 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 OR2L8Q8NGY9 312 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 LILRB4Q8NHJ6 448 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 SPATA3Q8NHX4 192 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 LINC01560Q8TB33 94 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 ENOX1Q8TC92 643 aaKnown RBP3.39□□□□□ -1.87
USP46-205ENST00000504078 METTL21AQ8WXB1 218 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 UBE2FQ969M7 185 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 PEX11GQ96HA9 241 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 CAPZA3Q96KX2 299 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 ZNF354BQ96LW1 612 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 ZNF285Q96NJ3 590 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 FCRL5Q96RD9 977 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 ZFYVE21Q9BQ24 234 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 TBL1YQ9BQ87 522 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 PIGQQ9BRB3 760 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 DPH7Q9BTV6 452 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 MAK16Q9BXY0 300 aaKnown RBP3.39□□□□□ -1.87
USP46-205ENST00000504078 DRC3Q9H069 523 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 ISCUQ9H1K1 167 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 HSD3B7Q9H2F3 369 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 TP63Q9H3D4 680 aaPredicted RBP3.39□□□□□ -1.87
USP46-205ENST00000504078 LIN28AQ9H9Z2 209 aaKnown RBP3.39□□□□□ -1.87
USP46-205ENST00000504078 MKKSQ9NPJ1 570 aaPredicted RBP3.39□□□□□ -1.87
USP46-205ENST00000504078 DEPPQ9NTK1 212 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 SLC2A6Q9UGQ3 507 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 LIMA1Q9UHB6 759 aaKnown RBP3.39□□□□□ -1.87
USP46-205ENST00000504078 TAC3Q9UHF0 121 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 EGFL7Q9UHF1 273 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 CAPN6Q9Y6Q1 641 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 KIAA1549Q9HCM3 1950 aa3.39□□□□□ -1.87
USP46-205ENST00000504078 NIPBLQ6KC79 2804 aaeCLIP3.38□□□□□ -1.87
USP46-205ENST00000504078 TRBV5-4A0A0C4DH59 114 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms