RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 FAM13CQ8NE31 585 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 FBXO27Q8NI29 283 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 STYXQ8WUJ0 223 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 ZNF669Q96BR6 464 aaPredicted RBP4.9□□□□□ -1.63
FXN-205ENST00000498653 CFAP36Q96G28 342 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 TTC25Q96NG3 672 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 TGM7Q96PF1 710 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 SH3GL2Q99962 352 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 WRAP53Q9BUR4 548 aaKnown RBP4.9□□□□□ -1.63
FXN-205ENST00000498653 KIFC1Q9BW19 673 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 LGR4Q9BXB1 951 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 SUDS3Q9H7L9 328 aaPredicted RBP4.9□□□□□ -1.63
FXN-205ENST00000498653 CHRAC1Q9NRG0 131 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 PCMTD2Q9NV79 361 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 NLE1Q9NVX2 485 aaPredicted RBP4.9□□□□□ -1.63
FXN-205ENST00000498653 ARGLU1Q9NWB6 273 aaPredicted RBP4.9□□□□□ -1.63
FXN-205ENST00000498653 KCTD5Q9NXV2 234 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 PKD2L2Q9NZM6 624 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 REV1Q9UBZ9 1251 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 ZC3H7BQ9UGR2 993 aaKnown RBP4.9□□□□□ -1.63
FXN-205ENST00000498653 NDOR1Q9UHB4 597 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 RIMKLBQ9ULI2 386 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 NPIPA1Q9UND3 350 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 PKP3Q9Y446 797 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 PCDHB14Q9Y5E9 798 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 ARL5AQ9Y689 179 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 TEX264Q9Y6I9 313 aa4.9□□□□□ -1.63
FXN-205ENST00000498653 TRBV23OR9-2A0A075B6M9 112 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 CCDC151A5D8V7 595 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 MROH6A6NGR9 719 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 AURKAO14965 403 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 ASNA1O43681 348 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 CNOT3O75175 753 aaKnown RBP4.89□□□□□ -1.63
FXN-205ENST00000498653 USP1O94782 785 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 KLK3P07288 261 aaPredicted RBP4.89□□□□□ -1.63
FXN-205ENST00000498653 UMODP07911 640 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 EBLN1P0CF75 366 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 LHCGRP22888 699 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 ZFP36P26651 326 aaKnown RBP4.89□□□□□ -1.63
FXN-205ENST00000498653 NMBRP28336 390 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 UQCRC1P31930 480 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 PHBP35232 272 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 ADMP35318 185 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 HMGCLP35914 325 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 SPINT3P49223 89 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 ZNF140P52738 457 aaPredicted RBP4.89□□□□□ -1.63
FXN-205ENST00000498653 PRAMEP78395 509 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 TMPRSS15P98073 1019 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 HHEXQ03014 270 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 PMPCAQ10713 525 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 ABRQ12979 859 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 THOC5Q13769 683 aaKnown RBP4.89□□□□□ -1.63
FXN-205ENST00000498653 SQLEQ14534 574 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 FASTKD3Q14CZ7 662 aaKnown RBP4.89□□□□□ -1.63
FXN-205ENST00000498653 CYP2A13Q16696 494 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 PTCHD3Q3KNS1 767 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 ANKRD20A4Q4UJ75 823 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 FAM120AOSQ5T036 256 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 ATG9BQ674R7 924 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 STEAP4Q687X5 459 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 VASNQ6EMK4 673 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 AFTPHQ6ULP2 937 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 CES3Q6UWW8 571 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 CERS6Q6ZMG9 384 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 UNC5AQ6ZN44 842 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 C3orf62Q6ZUJ4 267 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 TRMT10CQ7L0Y3 403 aaKnown RBP4.89□□□□□ -1.63
FXN-205ENST00000498653 HSD11B1LQ7Z5J1 315 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 TMEM126BQ8IUX1 230 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 IGDCC3Q8IVU1 814 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 RAVER1Q8IY67 606 aaKnown RBP4.89□□□□□ -1.63
FXN-205ENST00000498653 OTUD6BQ8N6M0 293 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 OR4K2Q8NGD2 314 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 OR13C4Q8NGS5 318 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 OR6P1Q8NGX9 317 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 GABPB2Q8TAK5 448 aaPredicted RBP4.89□□□□□ -1.63
FXN-205ENST00000498653 FAM57AQ8TBR7 257 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 AENQ8WTP8 325 aaKnown RBP4.89□□□□□ -1.63
FXN-205ENST00000498653 HAS2Q92819 552 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 PEX13Q92968 403 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 CAVIN3Q969G5 261 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.89□□□□□ -1.63
FXN-205ENST00000498653 MFSD3Q96ES6 412 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 EAF1Q96JC9 268 aaPredicted RBP4.89□□□□□ -1.63
FXN-205ENST00000498653 SLC41A2Q96JW4 573 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 ZNF514Q96K75 400 aaPredicted RBP4.89□□□□□ -1.63
FXN-205ENST00000498653 DNAJC1Q96KC8 554 aaKnown RBP4.89□□□□□ -1.63
FXN-205ENST00000498653 COQ10AQ96MF6 247 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 FERD3LQ96RJ6 166 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 MIPEPQ99797 713 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 C19orf43Q9BQ61 176 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 CDC42EP4Q9H3Q1 356 aaKnown RBP4.89□□□□□ -1.63
FXN-205ENST00000498653 EPB41L1Q9H4G0 881 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 FAM83DQ9H4H8 585 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 VPS37BQ9H9H4 285 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 CARS2Q9HA77 564 aaKnown RBP4.89□□□□□ -1.63
FXN-205ENST00000498653 BPIFA1Q9NP55 256 aa4.89□□□□□ -1.63
FXN-205ENST00000498653 SARS2Q9NP81 518 aaKnown RBP4.89□□□□□ -1.63
FXN-205ENST00000498653 ZNF701Q9NV72 531 aaPredicted RBP4.89□□□□□ -1.63
FXN-205ENST00000498653 NINJ2Q9NZG7 142 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms