RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 SERPINA7P05543 415 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 CELA2AP08217 269 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 LTA4HP09960 611 aaKnown RBP17.36■□□□□ 0.37
HOXD11-202ENST00000498438 KCNC1P48547 511 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 SKP1P63208 163 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 OLR1P78380 273 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 GLE1Q53GS7 698 aaKnown RBP17.36■□□□□ 0.37
HOXD11-202ENST00000498438 IGFL2Q6UWQ7 119 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 ISLR2Q6UXK2 745 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 Q6ZS92 163 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 IQCKQ8N0W5 287 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 SNX31Q8N9S9 440 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 KIF18AQ8NI77 898 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 STAG3L4Q8TBR4 150 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 BRIX1Q8TDN6 353 aaKnown RBP17.36■□□□□ 0.37
HOXD11-202ENST00000498438 CREB3L4Q8TEY5 395 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 PPP4R1Q8TF05 950 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 OR1F2PQ96R84 312 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 FMO2Q99518 471 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 CAPS2Q9BXY5 557 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 CDC42EP4Q9H3Q1 356 aaKnown RBP17.36■□□□□ 0.37
HOXD11-202ENST00000498438 KLHL31Q9H511 634 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 ACSS3Q9H6R3 686 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 EPS8L2Q9H6S3 715 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 NMRAL1Q9HBL8 299 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 NUDT4Q9NZJ9 180 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 C19orf25Q9UFG5 118 aaPredicted RBP17.36■□□□□ 0.37
HOXD11-202ENST00000498438 PTBP2Q9UKA9 531 aaKnown RBP17.36■□□□□ 0.37
HOXD11-202ENST00000498438 IGHV3-20A0A0C4DH32 117 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 HMX2A2RU54 273 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 URADA6NGE7 173 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 SUPT3HB4E1H0 165 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 C4orf51C9J302 202 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 KERAO60938 352 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 DNAJB6O75190 326 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 H2AFYO75367 372 aaKnown RBP17.35■□□□□ 0.37
HOXD11-202ENST00000498438 SUPT3HO75486 399 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 SEC24DO94855 1032 aaPredicted RBP17.35■□□□□ 0.37
HOXD11-202ENST00000498438 ACSL3O95573 720 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 SERPINA6P08185 405 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 ECHS1P30084 290 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 UQCRFS1P47985 274 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 RAB8AP61006 207 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 IRF9Q00978 393 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 MFAP5Q13361 173 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 PDK4Q16654 411 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 TOR1AIP1Q5JTV8 583 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 NIPAL1Q6NVV3 410 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 TMIGD1Q6UXZ0 262 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 LINC00696Q6ZRV3 163 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 CPEB2Q7Z5Q1 589 aaKnown RBP17.35■□□□□ 0.37
HOXD11-202ENST00000498438 ISCA2Q86U28 154 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 CUZD1Q86UP6 607 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 CENPLQ8N0S6 344 aaPredicted RBP17.35■□□□□ 0.37
HOXD11-202ENST00000498438 KRT78Q8N1N4 520 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 AMER2Q8N7J2 671 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 KCTD4Q8WVF5 259 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 PSMF1Q92530 271 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 ATOH8Q96SQ7 321 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 TUBB6Q9BUF5 446 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 AICDAQ9GZX7 198 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 TSPYL1Q9H0U9 437 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 SNX15Q9NRS6 342 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 LANCL2Q9NS86 450 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 MAP10Q9P2G4 905 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 ACOT9Q9Y305 439 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 ASB1Q9Y576 335 aa17.35■□□□□ 0.37
HOXD11-202ENST00000498438 A0A087X1B8 175 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 UBXN8O00124 270 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 CLGNO14967 610 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 CHST10O43529 356 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 CCNT2O60583 730 aaKnown RBP17.34■□□□□ 0.37
HOXD11-202ENST00000498438 PRAMEF4O60810 478 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 VPS4BO75351 444 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 FHP07954 510 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 ITGAMP11215 1152 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 IL10P22301 178 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 SOX11P35716 441 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 RHAGQ02094 409 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 ABRAXAS2Q15018 415 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 CRB2Q5IJ48 1285 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 PRAMEF9Q5VWM5 478 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 RIPOR1Q6ZS17 1223 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 CCDC91Q7Z6B0 441 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 ANKRD37Q7Z713 158 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 CPAMD8Q8IZJ3 1885 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 SIRT6Q8N6T7 355 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 GALNT11Q8NCW6 608 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 TTLQ8NG68 377 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 CCT6BQ92526 530 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 TSLPQ969D9 159 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 TBC1D20Q96BZ9 403 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 NXNL1Q96CM4 212 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 CNDP1Q96KN2 507 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 IMMP1LQ96LU5 166 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 FUT8Q9BYC5 575 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 EHD1Q9H4M9 534 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 PTGFRNQ9P2B2 879 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 COPG2Q9UBF2 871 aa17.34■□□□□ 0.37
HOXD11-202ENST00000498438 HECTD1Q9ULT8 2610 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms