RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 SHCBP1LQ9BZQ2 653 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 REXO4Q9GZR2 422 aaKnown RBP18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 NSRP1Q9H0G5 558 aaKnown RBP18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 PNPOQ9NVS9 261 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 OCIAD1Q9NX40 245 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 CDC14AQ9UNH5 594 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 PCDHGA7Q9Y5G6 932 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 USH1CQ9Y6N9 552 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 HYKKA2RU49 373 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 H0YIG0 161 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 POLR3GO15318 223 aaPredicted RBP18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 HCRTR1O43613 425 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 VIMP08670 466 aaKnown RBP18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 PRR35P0CG20 571 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 CD82P27701 267 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 SERPINB3P29508 390 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 HTR6P50406 440 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 NEK2P51955 445 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 RPS13P62277 151 aaKnown RBP18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 MAD2L1Q13257 205 aaPredicted RBP18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 KCNAB1Q14722 419 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 GPR19Q15760 415 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 DCAF12Q5T6F0 453 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 OGFOD2Q6N063 350 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 TRIM40Q6P9F5 258 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 ABHD17CQ6PCB6 329 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 PAGE2Q7Z2X7 111 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 METTL4Q8N3J2 472 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 ZCCHC7Q8N3Z6 543 aaKnown RBP18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 ACTRT2Q8TDY3 377 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 CHTF18Q8WVB6 975 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 FCRL1Q96LA6 429 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 NDC1Q9BTX1 674 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 NPLQ9BXD5 320 aaPredicted RBP18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 ACPTQ9BZG2 426 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 DDX31Q9H8H2 851 aaKnown RBP18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 SYNPO2LQ9H987 977 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 POLR1BQ9H9Y6 1135 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 MRGBPQ9NV56 204 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 ACSL6Q9UKU0 697 aa18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 RUVBL1Q9Y265 456 aaKnown RBP18.79■□□□□ 0.6
SCAMP3-209ENST00000497470 DCDC2BA2VCK2 349 aa18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 PIP5K1BO14986 540 aa18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 NVLO15381 856 aaKnown RBP18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 NSA2O95478 260 aaKnown RBP18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 JMJD7P0C870 316 aa18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 ALOX12P18054 663 aa18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 GNGT1P63211 74 aa18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 BTKQ06187 659 aa18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 TBL3Q12788 808 aaKnown RBP18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 MAP7Q14244 749 aa18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 RTP5Q14D33 572 aa18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 EPGNQ6UW88 154 aa18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 FAM47EQ6ZV65 393 aa18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 UTP15Q8TED0 518 aaKnown RBP18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 CCDC28BQ9BUN5 200 aa18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 PRDM9Q9NQV7 894 aa18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 FARSBQ9NSD9 589 aaKnown RBP18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 C1orf109Q9NX04 203 aa18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 SLC39A1Q9NY26 324 aa18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 ASIC5Q9NY37 505 aa18.78■□□□□ 0.6
SCAMP3-209ENST00000497470 TMEM233B4DJY2 109 aa18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 DSCR3O14972 297 aa18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 LSM1O15116 133 aaKnown RBP18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 P2RX6O15547 441 aa18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 TGFB1P01137 390 aa18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 CCL4P13236 92 aa18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 HNRNPH1P31943 449 aaKnown RBP18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 TRA2BP62995 288 aaKnown RBP18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 FOXM1Q08050 763 aa18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 KIAA0040Q15053 153 aa18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 IMPG1Q17R60 797 aa18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 DEFB110Q30KQ9 67 aa18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 TCHHL1Q5QJ38 904 aaPredicted RBP18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 FAM9CQ8IZT9 166 aa18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 C7orf57Q8NEG2 295 aa18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 CEP70Q8NHQ1 597 aa18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 PRR11Q96HE9 360 aaPredicted RBP18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 SPRY4Q9C004 299 aa18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 SPRTNQ9H040 489 aaPredicted RBP18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 EPN3Q9H201 632 aa18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 CUTCQ9NTM9 273 aa18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 FGFR1OP2Q9NVK5 253 aa18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 KLHL14Q9P2G3 628 aa18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 SLC12A4Q9UP95 1085 aa18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 TMEM184BQ9Y519 407 aaPredicted RBP18.77■□□□□ 0.6
SCAMP3-209ENST00000497470 A0A1B0GX78 115 aa18.76■□□□□ 0.59
SCAMP3-209ENST00000497470 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.76■□□□□ 0.59
SCAMP3-209ENST00000497470 EIF2S1P05198 315 aaKnown RBP18.76■□□□□ 0.59
SCAMP3-209ENST00000497470 IL10P22301 178 aa18.76■□□□□ 0.59
SCAMP3-209ENST00000497470 MTTPP55157 894 aa18.76■□□□□ 0.59
SCAMP3-209ENST00000497470 DDX39BQ13838 428 aaKnown RBP18.76■□□□□ 0.59
SCAMP3-209ENST00000497470 HKDC1Q2TB90 917 aa18.76■□□□□ 0.59
SCAMP3-209ENST00000497470 AP5B1Q2VPB7 878 aa18.76■□□□□ 0.59
SCAMP3-209ENST00000497470 ATP6AP1LQ52LC2 224 aa18.76■□□□□ 0.59
SCAMP3-209ENST00000497470 METTL21CQ5VZV1 264 aa18.76■□□□□ 0.59
SCAMP3-209ENST00000497470 OR4C11Q6IEV9 310 aa18.76■□□□□ 0.59
SCAMP3-209ENST00000497470 ADNP2Q6IQ32 1131 aa18.76■□□□□ 0.59
SCAMP3-209ENST00000497470 LARP4Q71RC2 724 aaKnown RBP eCLIP18.76■□□□□ 0.59
SCAMP3-209ENST00000497470 ZFAND4Q86XD8 727 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms