RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 PMP22Q01453 160 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 RELAQ04206 551 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 LTBQ06643 244 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 NKG7Q16617 165 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 KBTBD12Q3ZCT8 623 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 FAAH2Q6GMR7 532 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 PAQR3Q6TCH7 311 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 Q6ZPB1 254 aaPredicted RBP9.3□□□□□ -0.92
SRSF4-205ENST00000497015 UBE2R2Q712K3 238 aaPredicted RBP9.3□□□□□ -0.92
SRSF4-205ENST00000497015 OVCH1Q7RTY7 1134 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 TRIM73Q86UV7 250 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 CPNE9Q8IYJ1 553 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 DTWD1Q8N5C7 304 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 GPATCH11Q8N954 259 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 C19orf47Q8N9M1 422 aaKnown RBP9.3□□□□□ -0.92
SRSF4-205ENST00000497015 LMNTD1Q8N9Z9 388 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 LINC01555Q8NAE3 123 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 PROKR1Q8TCW9 393 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 DENND1AQ8TEH3 1009 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 EEF1AKMT1Q8WVE0 214 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 SMPDL3AQ92484 453 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 CCDC138Q96M89 665 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 CYTH2Q99418 400 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 NDNQ99608 321 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 FOXC2Q99958 501 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 XKR8Q9H6D3 395 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 PARVBQ9HBI1 364 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 SMYD2Q9NRG4 433 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 CCM2LQ9NUG4 571 aaPredicted RBP9.3□□□□□ -0.92
SRSF4-205ENST00000497015 UTP6Q9NYH9 597 aaKnown RBP9.3□□□□□ -0.92
SRSF4-205ENST00000497015 PSAT1Q9Y617 370 aa9.3□□□□□ -0.92
SRSF4-205ENST00000497015 PABPN1LA6NDY0 278 aaKnown RBP9.29□□□□□ -0.92
SRSF4-205ENST00000497015 CD63P08962 238 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 HIST1H2AGP0C0S8 130 aaPredicted RBP9.29□□□□□ -0.92
SRSF4-205ENST00000497015 HIST1H2ADP20671 130 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 HRH2P25021 359 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 PEBP1P30086 187 aaKnown RBP9.29□□□□□ -0.92
SRSF4-205ENST00000497015 BDKRB1P46663 353 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 SMSP52788 366 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 PNLIPRP1P54315 467 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 SLC12A2P55011 1212 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 ARG2P78540 354 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 ABATP80404 500 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 CDKL1Q00532 357 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.29□□□□□ -0.921e-15■□□□□ 8.6
SRSF4-205ENST00000497015 ZC3H12BQ5HYM0 836 aaKnown RBP9.29□□□□□ -0.92
SRSF4-205ENST00000497015 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.29□□□□□ -0.92
SRSF4-205ENST00000497015 CHERPQ8IWX8 916 aaKnown RBP9.29□□□□□ -0.92
SRSF4-205ENST00000497015 GPR135Q8IZ08 494 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 DNAJC22Q8N4W6 341 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 OR2A1Q8NGT9 310 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 ATL1Q8WXF7 558 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 IFT81Q8WYA0 676 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 FAM136AQ96C01 138 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 LINGO1Q96FE5 620 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 HIST1H2AHQ96KK5 128 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 OLFM1Q99784 485 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 HIST1H2AJQ99878 128 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 C17orf62Q9BQA9 187 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 H2AFJQ9BTM1 129 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 TRIM54Q9BYV2 358 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 PCBD2Q9H0N5 130 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 SOX17Q9H6I2 414 aaPredicted RBP9.29□□□□□ -0.92
SRSF4-205ENST00000497015 ACSS3Q9H6R3 686 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 SPHK1Q9NYA1 384 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.29□□□□□ -0.92
SRSF4-205ENST00000497015 PTGFRNQ9P2B2 879 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 AP1M2Q9Y6Q5 423 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 NUP210LQ5VU65 1888 aa9.29□□□□□ -0.92
SRSF4-205ENST00000497015 A0A1W2PPV9 198 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 VSTM2BA6NLU5 285 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 CXorf49A8MYA2 514 aaPredicted RBP9.28□□□□□ -0.92
SRSF4-205ENST00000497015 E7ENX8 843 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 TPD52L2O43399 206 aaKnown RBP9.28□□□□□ -0.92
SRSF4-205ENST00000497015 RASAL1O95294 804 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 WISP3O95389 354 aaPredicted RBP9.28□□□□□ -0.92
SRSF4-205ENST00000497015 WDPCPO95876 746 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 SLC16A8O95907 504 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 CELA2AP08217 269 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 ABHD2P08910 425 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 ESRRAP11474 423 aaPredicted RBP9.28□□□□□ -0.92
SRSF4-205ENST00000497015 STMN1P16949 149 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 CNTFP26441 200 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 CMPK1P30085 196 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 TAP2Q03519 686 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 PRDX1Q06830 199 aaKnown RBP9.28□□□□□ -0.92
SRSF4-205ENST00000497015 SF1Q15637 639 aaKnown RBP9.28□□□□□ -0.92
SRSF4-205ENST00000497015 ZKSCAN8Q15776 578 aaPredicted RBP9.28□□□□□ -0.92
SRSF4-205ENST00000497015 TUBB8Q3ZCM7 444 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 CDKL4Q5MAI5 379 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 ATG9BQ674R7 924 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 TRMT10CQ7L0Y3 403 aaKnown RBP9.28□□□□□ -0.92
SRSF4-205ENST00000497015 PIWIL4Q7Z3Z4 852 aaKnown RBP9.28□□□□□ -0.92
SRSF4-205ENST00000497015 ADAMTSL2Q86TH1 951 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 SPPL2CQ8IUH8 684 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 CTAGE3PQ8IX95 158 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 GALNT12Q8IXK2 581 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 PPM1NQ8N819 430 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 DNAJB8Q8NHS0 232 aa9.28□□□□□ -0.92
SRSF4-205ENST00000497015 ZNF480Q8WV37 535 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms