RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 IQCF3P0C7M6 154 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 OR2T7P0C7T2 308 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 NPIPA8P0DM63 369 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SAT1P21673 171 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 IGFBP5P24593 272 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 MC5RP33032 325 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 GRK5P34947 590 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 GJA4P35212 333 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 MAP2K6P52564 334 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 PRKAG1P54619 331 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ARSFP54793 590 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SUMO3P55854 103 aaPredicted RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 RPL26P61254 145 aaKnown RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 TNNC1P63316 161 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 NOMO3P69849 1222 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CDR2Q01850 454 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 MEF2AQ02078 507 aaPredicted RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 FOLH1Q04609 750 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SF3A3Q12874 501 aaKnown RBP eCLIP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 DUSP8Q13202 625 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SCGB2A2Q13296 93 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CDK10Q15131 360 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 NADK2Q4G0N4 442 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 GXYLT1Q4G148 440 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 FAM47AQ5JRC9 791 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ARHGAP40Q5TG30 622 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 AGBL4Q5VU57 503 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 MEDAGQ5VYS4 303 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 GAREM2Q75VX8 874 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CXXC5Q7LFL8 322 aaKnown RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 P4HA3Q7Z4N8 544 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 PRSS42Q7Z5A4 293 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 TFAP2DQ7Z6R9 452 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 NT5DC3Q86UY8 548 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 GPBP1Q86WP2 473 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 TMEM17Q86X19 198 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC35F3Q8IY50 421 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CENPLQ8N0S6 344 aaPredicted RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 KDM8Q8N371 416 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 COMMD1Q8N668 190 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ACBD4Q8NC06 268 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 TMEM35BQ8NCS4 154 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 OR10A7Q8NGE5 316 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 OR5AN1Q8NGI8 311 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 OR52H1Q8NGJ2 320 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CKAP2Q8WWK9 683 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ELMO1Q92556 727 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 HAS2Q92819 552 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 STMN2Q93045 179 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SPSB4Q96A44 273 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 DYDC2Q96IM9 177 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF597Q96LX8 424 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 TEPSINQ96N21 525 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 BTBD9Q96Q07 612 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 KRTAP9-3Q9BYQ3 159 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ZDHHC5Q9C0B5 715 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CCDC90BQ9GZT6 254 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 GANQ9H2C0 597 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 TTYH1Q9H313 450 aaPredicted RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 KLHL31Q9H511 634 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CHODLQ9H9P2 273 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 TLR9Q9NR96 1032 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SACM1LQ9NTJ5 587 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 RNF146Q9NTX7 359 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 DDX19AQ9NUU7 478 aaKnown RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 PARPBPQ9NWS1 579 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 MS4A12Q9NXJ0 267 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 MAT2BQ9NZL9 334 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CD274Q9NZQ7 290 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ABCG2Q9UNQ0 655 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 TESMINQ9Y4I5 508 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ZHX2Q9Y6X8 837 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 HFM1A2PYH4 1435 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ARHGEF17Q96PE2 2063 aaPredicted RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 A0A0G2JNJ9 132 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ERI2A8K979 691 aaKnown RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 NEDD8-MDP1E9PL57 170 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 M0QZK8 103 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 AGPSO00116 658 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 GPAA1O43292 621 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 TLX3O43711 291 aaPredicted RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 DFNA5O60443 496 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 PDE9AO76083 593 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 GH2P01242 217 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 CD1EP15812 388 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 CALML3P27482 149 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 TEAD1P28347 426 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 TM4SF1P30408 202 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ICAM3P32942 547 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 PSMB10P40306 273 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 BTDP43251 543 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MAGEA6P43360 314 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 PNLIPRP1P54315 467 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ACTR2P61160 394 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ESRRGP62508 458 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 NHLH1Q02575 133 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF91Q05481 1191 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 FOXL1Q12952 345 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms