RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 NLNQ9BYT8 704 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 KLHL31Q9H511 634 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 FANCEQ9HB96 536 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 LRTM1Q9HBL6 345 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 TCF7L2Q9NQB0 619 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 STARD5Q9NSY2 213 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 OCIAD1Q9NX40 245 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 CLCA2Q9UQC9 943 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 CNOT1A5YKK6 2376 aaKnown RBP17.4■□□□□ 0.38
RGP1-202ENST00000496906 FITM1A5D6W6 292 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 C4orf51C9J302 202 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 SAP18O00422 153 aaKnown RBP17.4■□□□□ 0.38
RGP1-202ENST00000496906 TXNDC9O14530 226 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 PEX11AO75192 247 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 CSO75390 466 aaKnown RBP17.4■□□□□ 0.38
RGP1-202ENST00000496906 LSM12Q3MHD2 195 aaKnown RBP17.4■□□□□ 0.38
RGP1-202ENST00000496906 GALNTL6Q49A17 601 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 TMEM35AQ53FP2 167 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 TOR1AIP1Q5JTV8 583 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 SPDYAQ5MJ70 313 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 C6orf136Q5SQH8 315 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 TMEM214Q6NUQ4 689 aaKnown RBP17.4■□□□□ 0.38
RGP1-202ENST00000496906 ACAD11Q709F0 780 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 BMPERQ8N8U9 685 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 APIPQ96GX9 242 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 LIN37Q96GY3 246 aaPredicted RBP17.4■□□□□ 0.38
RGP1-202ENST00000496906 OR6C1Q96RD1 312 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 CENPKQ9BS16 269 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 CCDC28BQ9BUN5 200 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 STRADBQ9C0K7 418 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 SPRTNQ9H040 489 aaPredicted RBP17.4■□□□□ 0.38
RGP1-202ENST00000496906 C1orf109Q9NX04 203 aa17.4■□□□□ 0.38
RGP1-202ENST00000496906 EFCAB7A8K855 629 aa17.39■□□□□ 0.37
RGP1-202ENST00000496906 PLPP1O14494 284 aa17.39■□□□□ 0.37
RGP1-202ENST00000496906 HYAL3O43820 417 aaPredicted RBP17.39■□□□□ 0.37
RGP1-202ENST00000496906 OR2B3O76000 313 aa17.39■□□□□ 0.37
RGP1-202ENST00000496906 ITGA1P56199 1179 aa17.39■□□□□ 0.37
RGP1-202ENST00000496906 SNRPNP63162 240 aaKnown RBP17.39■□□□□ 0.37
RGP1-202ENST00000496906 KIAA0040Q15053 153 aa17.39■□□□□ 0.37
RGP1-202ENST00000496906 AP5B1Q2VPB7 878 aa17.39■□□□□ 0.37
RGP1-202ENST00000496906 UBE3DQ7Z6J8 389 aa17.39■□□□□ 0.37
RGP1-202ENST00000496906 ZFAND4Q86XD8 727 aa17.39■□□□□ 0.37
RGP1-202ENST00000496906 METTL4Q8N3J2 472 aa17.39■□□□□ 0.37
RGP1-202ENST00000496906 OR2L5Q8NG80 312 aa17.39■□□□□ 0.37
RGP1-202ENST00000496906 CEP70Q8NHQ1 597 aa17.39■□□□□ 0.37
RGP1-202ENST00000496906 UTP15Q8TED0 518 aaKnown RBP17.39■□□□□ 0.37
RGP1-202ENST00000496906 CHTF18Q8WVB6 975 aa17.39■□□□□ 0.37
RGP1-202ENST00000496906 GAL3ST3Q96A11 431 aa17.39■□□□□ 0.37
RGP1-202ENST00000496906 C11orf24Q96F05 449 aaPredicted RBP17.39■□□□□ 0.37
RGP1-202ENST00000496906 METTL2AQ96IZ6 378 aaKnown RBP17.39■□□□□ 0.37
RGP1-202ENST00000496906 CMKLR1Q99788 373 aa17.39■□□□□ 0.37
RGP1-202ENST00000496906 RTKNQ9BST9 563 aa17.39■□□□□ 0.37
RGP1-202ENST00000496906 ZNF717Q9BY31 904 aaPredicted RBP17.39■□□□□ 0.37
RGP1-202ENST00000496906 IRAK4Q9NWZ3 460 aa17.39■□□□□ 0.37
RGP1-202ENST00000496906 URADA6NGE7 173 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 ERI3O43414 337 aaKnown RBP17.38■□□□□ 0.37
RGP1-202ENST00000496906 LBPP18428 481 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 SDHBP21912 280 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 RAP1GDS1P52306 607 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 ARFIP1P53367 373 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 PLA2G16P53816 162 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 RPL38P63173 70 aaKnown RBP17.38■□□□□ 0.37
RGP1-202ENST00000496906 FOXM1Q08050 763 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 RFTN2Q52LD8 501 aaPredicted RBP17.38■□□□□ 0.37
RGP1-202ENST00000496906 SPIN4Q56A73 249 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 NXNQ6DKJ4 435 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 OGFOD2Q6N063 350 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 ABHD17CQ6PCB6 329 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 CACTIN-AS1Q8N1I8 211 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 C1orf52Q8N6N3 182 aaKnown RBP17.38■□□□□ 0.37
RGP1-202ENST00000496906 SRFBP1Q8NEF9 429 aaKnown RBP17.38■□□□□ 0.37
RGP1-202ENST00000496906 ZCCHC10Q8TBK6 192 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 BCAS4Q8TDM0 211 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 RGMAQ96B86 450 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 C10orf90Q96M02 699 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 LHX9Q9NQ69 397 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 AKAP7Q9P0M2 348 aaPredicted RBP17.38■□□□□ 0.37
RGP1-202ENST00000496906 SERTAD3Q9UJW9 196 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 RARRES3Q9UL19 164 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 MRPS2Q9Y399 296 aaKnown RBP17.38■□□□□ 0.37
RGP1-202ENST00000496906 LOXL2Q9Y4K0 774 aa17.38■□□□□ 0.37
RGP1-202ENST00000496906 RTCAO00442 366 aaKnown RBP17.37■□□□□ 0.37
RGP1-202ENST00000496906 SEC22BO75396 215 aa17.37■□□□□ 0.37
RGP1-202ENST00000496906 ZNF888P0CJ79 500 aaPredicted RBP17.37■□□□□ 0.37
RGP1-202ENST00000496906 SMIM10L1P0DMW3 83 aa17.37■□□□□ 0.37
RGP1-202ENST00000496906 CCL4P13236 92 aa17.37■□□□□ 0.37
RGP1-202ENST00000496906 GCGRP47871 477 aa17.37■□□□□ 0.37
RGP1-202ENST00000496906 RAB8AP61006 207 aa17.37■□□□□ 0.37
RGP1-202ENST00000496906 ACSM2AQ08AH3 577 aa17.37■□□□□ 0.37
RGP1-202ENST00000496906 GRM7Q14831 915 aa17.37■□□□□ 0.37
RGP1-202ENST00000496906 SMU1Q2TAY7 513 aa17.37■□□□□ 0.37
RGP1-202ENST00000496906 GARNL3Q5VVW2 1013 aa17.37■□□□□ 0.37
RGP1-202ENST00000496906 ACSM2BQ68CK6 577 aa17.37■□□□□ 0.37
RGP1-202ENST00000496906 TLDC1Q6P9B6 456 aa17.37■□□□□ 0.37
RGP1-202ENST00000496906 TRIM40Q6P9F5 258 aa17.37■□□□□ 0.37
RGP1-202ENST00000496906 ABHD13Q7L211 337 aa17.37■□□□□ 0.37
RGP1-202ENST00000496906 COMMD6Q7Z4G1 85 aa17.37■□□□□ 0.37
RGP1-202ENST00000496906 GPR135Q8IZ08 494 aa17.37■□□□□ 0.37
RGP1-202ENST00000496906 FNDC5Q8NAU1 212 aa17.37■□□□□ 0.37
RGP1-202ENST00000496906 OR8K5Q8NH50 307 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms