RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 NKX2-8O15522 239 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 FOXS1O43638 330 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 PRAMEF4O60810 478 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 KLHL18O94889 574 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 MED26O95402 600 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 ONECUT2O95948 504 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 RECKO95980 971 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 CAPN1P07384 714 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 ZNF888P0CJ79 500 aaPredicted RBP11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 WT1P19544 449 aaPredicted RBP11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 CDH13P55290 713 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 RAB8AP61006 207 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 IFT88Q13099 833 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 DDX39BQ13838 428 aaKnown RBP11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 E2F2Q14209 437 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 DEFB134Q4QY38 66 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 CRTC2Q53ET0 693 aaPredicted RBP11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 PRAMEF9Q5VWM5 478 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 LIPMQ5VYY2 423 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 MRPL14Q6P1L8 145 aaKnown RBP11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 TRIM40Q6P9F5 258 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 CHSY3Q70JA7 882 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 RAB43Q86YS6 212 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 LAS2Q8IYD9 372 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 ARHGEF39Q8N4T4 335 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 DTWD1Q8N5C7 304 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 L3MBTL4Q8NA19 623 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 SRFBP1Q8NEF9 429 aaKnown RBP11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 OR7G3Q8NG95 312 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 OR52B6Q8NGF0 335 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 OR2Y1Q8NGV0 311 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 TCP10LQ8TDR4 215 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 UTP15Q8TED0 518 aaKnown RBP11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 CREB3L4Q8TEY5 395 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 GAL3ST3Q96A11 431 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 ZBTB9Q96C00 473 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 MIEF2Q96C03 454 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 L3HYPDHQ96EM0 354 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 PGM2Q96G03 612 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 CATSPER2Q96P56 530 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 FAM111AQ96PZ2 611 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 SLC6A16Q9GZN6 736 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 REXO4Q9GZR2 422 aaKnown RBP11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 SLC26A1Q9H2B4 701 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 PRORYQ9H606 182 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 WDR54Q9H977 334 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 MKKSQ9NPJ1 570 aaPredicted RBP11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 MRPS2Q9Y399 296 aaKnown RBP11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 RNF11Q9Y3C5 154 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 MAP4K5Q9Y4K4 846 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 CDC14CA4D256 554 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 H0YIV9 168 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 ERI3O43414 337 aaKnown RBP11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 ZGLP1P0C6A0 271 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 TSPAN8P19075 237 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 OTX2P32243 289 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 PIK3CBP42338 1070 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 NAGLUP54802 743 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 DNAJB13P59910 316 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 CDC20Q12834 499 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 LCP2Q13094 533 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 SSPNQ14714 243 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 ZRSR2Q15696 482 aaKnown RBP11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 NKG7Q16617 165 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 UGT8Q16880 541 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 UNC50Q53HI1 259 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 C10orf62Q5T681 223 aaPredicted RBP11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 MFSD4BQ5TF39 518 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 RPS27LQ71UM5 84 aaKnown RBP11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 COX15Q7KZN9 410 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 PRSS41Q7RTY9 318 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 HDXQ7Z353 690 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 EXOC3L1Q86VI1 746 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 AFAP1L2Q8N4X5 818 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 OR2L5Q8NG80 312 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 OR4F6Q8NGB9 312 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 OR51Q1Q8NH59 317 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 HUS1BQ8NHY5 278 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 STT3BQ8TCJ2 826 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 SNRNP27Q8WVK2 155 aaKnown RBP11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 CMTM7Q96FZ5 175 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 CRELD1Q96HD1 420 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 VPS50Q96JG6 964 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 C12orf65Q9H3J6 166 aaKnown RBP11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 KLHL31Q9H511 634 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 ELOVL6Q9H5J4 265 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 SOX17Q9H6I2 414 aaPredicted RBP11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 COPS7BQ9H9Q2 264 aaPredicted RBP11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 ZBTB26Q9HCK0 441 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 KCNK9Q9NPC2 374 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 SLC22A11Q9NSA0 550 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 C14orf105Q9NVL8 296 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 OXSMQ9NWU1 459 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 HCN3Q9P1Z3 774 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 CTSFQ9UBX1 484 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 SNX6Q9UNH7 406 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 POLHQ9Y253 713 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 ACTL7BQ9Y614 415 aa11.46□□□□□ -0.57
CSNK1E-213ENST00000495232 EPG5Q9HCE0 2579 aa11.46□□□□□ -0.58
CSNK1E-213ENST00000495232 FER1L5A0AVI2 2057 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms