RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 ACTRT1Q8TDG2 376 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 TBC1D20Q96BZ9 403 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 OSBPL9Q96SU4 736 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 ASIC3Q9UHC3 531 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 ZNF835Q9Y2P0 537 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 TRBC2A0A5B9 178 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 ASPDHA6ND91 283 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 NPIPA5E9PKD4 350 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 NDC80O14777 642 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 NEURL1O76050 574 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 TTC4O95801 387 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 B3GALT4O96024 378 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 AHSGP02765 367 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 SP1P08047 785 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 ZNF888P0CJ79 500 aaPredicted RBP9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 ABOP16442 354 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 ALOX12P18054 663 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 AGAP20933 346 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 SMSP52788 366 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 PGGT1BP53609 377 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 AP1S2P56377 157 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 IL2P60568 153 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 OLR1P78380 273 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 RGS1Q08116 209 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 PDAP1Q13442 181 aaKnown RBP9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 PWP1Q13610 501 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 MAPKAPK3Q16644 382 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 BBS9Q3SYG4 887 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 MSS51Q4VC12 460 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 SPANXN3Q5MJ09 141 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 HP1BP3Q5SSJ5 553 aaPredicted RBP9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 NIPAL1Q6NVV3 410 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 Q6ZPB1 254 aaPredicted RBP9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 SPPL2CQ8IUH8 684 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 IGDCC3Q8IVU1 814 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 LGI4Q8N135 537 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 SLC35F6Q8N357 371 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 KIF2BQ8N4N8 673 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 AFAP1L2Q8N4X5 818 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 TBC1D19Q8N5T2 526 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 GPATCH11Q8N954 259 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 ABHD11Q8NFV4 315 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 OR4K1Q8NGD4 311 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 OR56A3Q8NH54 315 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 ELP5Q8TE02 316 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 ADAMTS18Q8TE60 1221 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 SNF8Q96H20 258 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 OR4K3Q96R72 315 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 SARGQ9BW04 601 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 TRIM54Q9BYV2 358 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 CDCP1Q9H5V8 836 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 LRFN1Q9P244 771 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 SLC17A6Q9P2U8 582 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 NPIPA1Q9UND3 350 aa9.64□□□□□ -0.87
NUDCD3-210ENST00000493613 AKAP9Q99996 3911 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 CHST10O43529 356 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 ASNA1O43681 348 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 NME2P1O60361 137 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 PRMT3O60678 531 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 B4GALT2O60909 372 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 DNAJB6O75190 326 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 SLC25A12O75746 678 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 CLDN14O95500 239 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 GUCA1CO95843 209 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 TSPAN12O95859 305 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 POU3F2P20265 443 aaPredicted RBP9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 NME2P22392 152 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 TPP2P29144 1249 aaPredicted RBP9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 CSHL1Q14406 222 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 CATSPEREQ5SY80 951 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 HECTD2Q5U5R9 776 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 ZNF468Q5VIY5 522 aaPredicted RBP9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 SLC25A25Q6KCM7 469 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 KIAA0408Q6ZU52 694 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 ABHD13Q7L211 337 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 STRA8Q7Z7C7 330 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 RPS19BP1Q86WX3 136 aaKnown RBP9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 SIAH3Q8IW03 269 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 CNTN4Q8IWV2 1026 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 CYP4X1Q8N118 509 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 GHDCQ8N2G8 530 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 NT5CQ8TCD5 201 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 ATL1Q8WXF7 558 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 NEIL2Q969S2 332 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 TRIM44Q96DX7 344 aaPredicted RBP9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 CERS2Q96G23 380 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 CFAP36Q96G28 342 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 LURAP1Q96LR2 239 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 TSNARE1Q96NA8 513 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 PTCHD1Q96NR3 888 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 TRIM51Q9BSJ1 452 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 NAT9Q9BTE0 207 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 TRIM8Q9BZR9 551 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 DDX47Q9H0S4 455 aaKnown RBP9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 SPNS1Q9H2V7 528 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 GPAMQ9HCL2 828 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 ZFP69BQ9UJL9 534 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 MEMO1Q9Y316 297 aa9.63□□□□□ -0.87
NUDCD3-210ENST00000493613 VWA7Q9Y334 891 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms