RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, human

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS36-205	ENST00000492650	RHOXF2B	P0C7M4	288 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	ERVK-10	P10266	1014 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	SKIL	P12757	684 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	CSF2RA	P15509	400 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	GNB3	P16520	340 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	ZNF23	P17027	643 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	CYP11B2	P19099	503 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	CYP2A7	P20853	494 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	ZNF10	P21506	573 aa	Predicted RBP	3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	CD9	P21926	228 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	ACAT1	P24752	427 aa	Known RBP	3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	OTX2	P32243	289 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	PRCP	P42785	496 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	GMPS	P49915	693 aa	Predicted RBP	3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	ETV1	P50549	477 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	VCP	P55072	806 aa	Known RBP	3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	MLLT10	P55197	1068 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	SRP54	P61011	504 aa	Known RBP	3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	HNRNPK	P61978	463 aa	Known RBP eCLIP	3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	UBE2H	P62256	183 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	GALK2	Q01415	458 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	TNK1	Q13470	666 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	ZMYND11	Q15326	602 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	DECR1	Q16698	335 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	NADK2	Q4G0N4	442 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	TECRL	Q5HYJ1	363 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	SPOUT1	Q5T280	376 aa	Known RBP	3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	KCTD11	Q693B1	232 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	FAM53A	Q6NSI3	398 aa	Predicted RBP	3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	PODNL1	Q6PEZ8	512 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	ZNF790	Q6PG37	636 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	PIGW	Q7Z7B1	504 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	GTSCR1	Q86UQ5	136 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	NRROS	Q86YC3	692 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	LRRC43	Q8N309	656 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	ARL14	Q8N4G2	192 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	AMER3	Q8N944	861 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	RASGEF1A	Q8N9B8	481 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	TMEM185A	Q8NFB2	350 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	STEAP2	Q8NFT2	490 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	TRIM58	Q8NG06	486 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	ZNF671	Q8TAW3	534 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	UBLCP1	Q8WVY7	318 aa	Predicted RBP	3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	ATL1	Q8WXF7	558 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	DNAAF4	Q8WXU2	420 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	TMEM190	Q8WZ59	177 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	RIT1	Q92963	219 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	IGSF8	Q969P0	613 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	AP2M1	Q96CW1	435 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	EGLN2	Q96KS0	407 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	HARBI1	Q96MB7	349 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	MUS81	Q96NY9	551 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	MS4A10	Q96PG2	267 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	PANX3	Q96QZ0	392 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	ZBTB18	Q99592	522 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	RHOXF2	Q9BQY4	288 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	UBXN6	Q9BZV1	441 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	TMEM117	Q9H0C3	514 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	THAP2	Q9H0W7	228 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	FN3K	Q9H479	309 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	YY1AP1	Q9H869	796 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	SLC28A3	Q9HAS3	691 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	FANCE	Q9HB96	536 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	ZNHIT6	Q9NWK9	470 aa	Known RBP	3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	GDAP2	Q9NXN4	497 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	UTP6	Q9NYH9	597 aa	Known RBP	3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	PSME2	Q9UL46	239 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	MTUS1	Q9ULD2	1270 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	EXOC6B	Q9Y2D4	811 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	MRPS7	Q9Y2R9	242 aa	Known RBP	3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	MAB21L2	Q9Y586	359 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	NCAPD2	Q15021	1401 aa		3.02	□□□□□ -1.93
VPS36-205	ENST00000492650	C15orf38-AP3S2	A0A0A6YYH1	394 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	GOLGA6L7	A0A1B0GV03	622 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	OR5K3	A6NET4	321 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	DUXA	A6NLW8	204 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	KBTBD13	C9JR72	458 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650		H0Y8G0	127 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	ATP2A1	O14983	1001 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	TEX28	O15482	410 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	BUB1	O43683	1085 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	CACNG3	O60359	315 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	FCGR3B	O75015	233 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	SURF6	O75683	361 aa	Known RBP	3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	RHOBTB1	O94844	696 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	BAG4	O95429	457 aa	Known RBP	3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	PAH	P00439	452 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	GH2	P01242	217 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	NR3C1	P04150	777 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	CD48	P09326	243 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	DANCR	P0C864	163 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	PLA2G4B	P0C869	781 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	LBP	P18428	481 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	AZGP1	P25311	298 aa	Known RBP	3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	SLC6A6	P31641	620 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	STIP1	P31948	543 aa	Known RBP	3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	CCR1	P32246	355 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	MAP2K2	P36507	400 aa		3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	HNRNPF	P52597	415 aa	Known RBP	3.01	□□□□□ -1.93
VPS36-205	ENST00000492650	SMS	P52788	366 aa		3.01	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms