RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 GBX1Q14549 363 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 ZBED5Q49AG3 693 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 HMBOX1Q6NT76 420 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 TTC33Q6PID6 262 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-219ENST00000491747 SLC22A9Q8IVM8 553 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 LMNTD1Q8N9Z9 388 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 C2CD4AQ8NCU7 369 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-219ENST00000491747 HMGCLL1Q8TB92 370 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 ADAMTS16Q8TE57 1224 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 ASZ1Q8WWH4 475 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 FGF11Q92914 225 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 HSPBAP1Q96EW2 488 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 ZNF578Q96N58 590 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-219ENST00000491747 TRMOQ9BU70 441 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 MVB12BQ9H7P6 319 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 LIN28AQ9H9Z2 209 aaKnown RBP9.03□□□□□ -0.96
BRCA1-219ENST00000491747 C8orf4Q9NR00 106 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 LATS2Q9NRM7 1088 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 HRASLS2Q9NWW9 162 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 FOXJ2Q9P0K8 574 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 EPHA6Q9UF33 1036 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 TSR3Q9UJK0 312 aaKnown RBP9.03□□□□□ -0.96
BRCA1-219ENST00000491747 ICKQ9UPZ9 632 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 SDK2Q58EX2 2172 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 SNRNP200O75643 2136 aaKnown RBP9.03□□□□□ -0.96
BRCA1-219ENST00000491747 IGHV5-51A0A0C4DH38 117 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 KRT87PA6NCN2 255 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 TRIM64CA6NLI5 447 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 EFCAB7A8K855 629 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 BTN3A1O00481 513 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 PRAMEF10O60809 474 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 RBP1P09455 135 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 POLR2CP19387 275 aaPredicted RBP9.02□□□□□ -0.96
BRCA1-219ENST00000491747 CHRM3P20309 590 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 NDUFS1P28331 727 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 CSTF2P33240 577 aaKnown RBP eCLIP9.02□□□□□ -0.96
BRCA1-219ENST00000491747 EIF2S3P41091 472 aaKnown RBP9.02□□□□□ -0.96
BRCA1-219ENST00000491747 SEPHS1P49903 392 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 ATP4BP51164 291 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 CLCN7P51798 805 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 SLC7A2P52569 658 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 ERVPABLB-1P60509 514 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 PLOD1Q02809 727 aaPredicted RBP9.02□□□□□ -0.96
BRCA1-219ENST00000491747 CSHL1Q14406 222 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 GRB7Q14451 532 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 TECRLQ5HYJ1 363 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 C8orf82Q6P1X6 216 aaPredicted RBP9.02□□□□□ -0.96
BRCA1-219ENST00000491747 KIAA0408Q6ZU52 694 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 GPR180Q86V85 440 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 CLVS1Q8IUQ0 354 aaPredicted RBP9.02□□□□□ -0.96
BRCA1-219ENST00000491747 TBC1D21Q8IYX1 336 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 ZNF786Q8N393 782 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 SMYD1Q8NB12 490 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 GOLM1Q8NBJ4 401 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 AGBL5Q8NDL9 886 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 OR5K2Q8NHB8 316 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 SNIP1Q8TAD8 396 aaKnown RBP9.02□□□□□ -0.96
BRCA1-219ENST00000491747 CANT1Q8WVQ1 401 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 ZUFSPQ96AP4 578 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 ISOC1Q96CN7 298 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 DCBLD2Q96PD2 775 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 PHF12Q96QT6 1004 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 MAP3K3Q99759 626 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 UNKQ9C0B0 810 aaKnown RBP9.02□□□□□ -0.96
BRCA1-219ENST00000491747 TFB2MQ9H5Q4 396 aaKnown RBP9.02□□□□□ -0.96
BRCA1-219ENST00000491747 APMAPQ9HDC9 416 aa9.02□□□□□ -0.96
BRCA1-219ENST00000491747 CCM2LQ9NUG4 571 aaPredicted RBP9.02□□□□□ -0.96
BRCA1-219ENST00000491747 TDRKHQ9Y2W6 561 aaKnown RBP9.02□□□□□ -0.96
BRCA1-219ENST00000491747 AQP12BA6NM10 295 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 ZNF839A8K0R7 811 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 A8MT66 165 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 SOCS2O14508 198 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 ANKRD34CP0C6C1 535 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 IL10P22301 178 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 MYF6P23409 242 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 PSMA4P25789 261 aaKnown RBP9.02□□□□□ -0.97
BRCA1-219ENST00000491747 ITPKBP27987 946 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 CDH15P55291 814 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 RAB15P59190 212 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 SH3BP2P78314 561 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 PPP1R3AQ16821 1122 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 CCSMST1Q4G0I0 132 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 TBCELQ5QJ74 424 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 PLEKHS1Q5SXH7 462 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 CACHD1Q5VU97 1274 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 PRMT9Q6P2P2 845 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 PATL1Q86TB9 770 aaKnown RBP9.02□□□□□ -0.97
BRCA1-219ENST00000491747 AQP12AQ8IXF9 295 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 ADGRF3Q8IZF5 1079 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 SIDT2Q8NBJ9 832 aaKnown RBP9.02□□□□□ -0.97
BRCA1-219ENST00000491747 ZNF420Q8TAQ5 688 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-219ENST00000491747 CALML6Q8TD86 181 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 LCN9Q8WX39 176 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 CTRCQ99895 268 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 HOPXQ9BPY8 73 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-219ENST00000491747 MENTQ9BUN1 341 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 ADI1Q9BV57 179 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 SRMSQ9H3Y6 488 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 ZNF768Q9H5H4 540 aaKnown RBP9.02□□□□□ -0.97
BRCA1-219ENST00000491747 FAIMQ9NVQ4 179 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms