RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 HKDC1Q2TB90 917 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 ADPRMQ3LIE5 342 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 TMTC4Q5T4D3 741 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 OGFOD2Q6N063 350 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 RBM44Q6ZP01 1051 aaKnown RBP20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 ZFAND4Q86XD8 727 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 ZNF655Q8N720 491 aaPredicted RBP20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 CSNK1A1LQ8N752 337 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 KCT2Q8NC54 265 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 KNTC1P50748 2209 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 SEMA3DO95025 777 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 CTSBP07858 339 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 CDK4P11802 303 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 FOLR1P15328 257 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 STXBP1P61764 594 aaKnown RBP20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 ERVK-8P63133 956 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 TRA2AQ13595 282 aaKnown RBP eCLIP20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 ANKS4BQ8N8V4 417 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 N4BP2L2Q92802 583 aaPredicted RBP20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 MS4A6EQ96DS6 147 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 C11orf24Q96F05 449 aaPredicted RBP20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 CENPKQ9BS16 269 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 KLHL31Q9H511 634 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 HEY2Q9UBP5 337 aa20.72■□□□□ 0.91
VCPKMT-204ENST00000491402 PLPP1O14494 284 aa20.71■□□□□ 0.91
VCPKMT-204ENST00000491402 ZSCAN9O15535 394 aaPredicted RBP20.71■□□□□ 0.91
VCPKMT-204ENST00000491402 ACSM2AQ08AH3 577 aa20.71■□□□□ 0.91
VCPKMT-204ENST00000491402 GPR19Q15760 415 aa20.71■□□□□ 0.91
VCPKMT-204ENST00000491402 TMEM35AQ53FP2 167 aa20.71■□□□□ 0.91
VCPKMT-204ENST00000491402 SPIN4Q56A73 249 aa20.71■□□□□ 0.91
VCPKMT-204ENST00000491402 TOR1AIP1Q5JTV8 583 aa20.71■□□□□ 0.91
VCPKMT-204ENST00000491402 WASHC2DQ5SRD0 308 aa20.71■□□□□ 0.91
VCPKMT-204ENST00000491402 METTL21CQ5VZV1 264 aa20.71■□□□□ 0.91
VCPKMT-204ENST00000491402 ACSM2BQ68CK6 577 aa20.71■□□□□ 0.91
VCPKMT-204ENST00000491402 CHTF18Q8WVB6 975 aa20.71■□□□□ 0.91
VCPKMT-204ENST00000491402 METTL2AQ96IZ6 378 aaKnown RBP20.71■□□□□ 0.91
VCPKMT-204ENST00000491402 ZNF285Q96NJ3 590 aa20.71■□□□□ 0.91
VCPKMT-204ENST00000491402 C1orf50Q9BV19 199 aa20.71■□□□□ 0.91
VCPKMT-204ENST00000491402 TRIM33Q9UPN9 1127 aa20.71■□□□□ 0.91
VCPKMT-204ENST00000491402 ALDOCP09972 364 aaKnown RBP20.7■□□□□ 0.9
VCPKMT-204ENST00000491402 EMX2Q04743 252 aa20.7■□□□□ 0.9
VCPKMT-204ENST00000491402 SMU1Q2TAY7 513 aa20.7■□□□□ 0.9
VCPKMT-204ENST00000491402 MANEAQ5SRI9 462 aa20.7■□□□□ 0.9
VCPKMT-204ENST00000491402 DGLUCYQ7Z3D6 616 aa20.7■□□□□ 0.9
VCPKMT-204ENST00000491402 C1orf52Q8N6N3 182 aaKnown RBP20.7■□□□□ 0.9
VCPKMT-204ENST00000491402 OR2L5Q8NG80 312 aa20.7■□□□□ 0.9
VCPKMT-204ENST00000491402 MARK4Q96L34 752 aa20.7■□□□□ 0.9
VCPKMT-204ENST00000491402 TMEM74Q96NL1 305 aa20.7■□□□□ 0.9
VCPKMT-204ENST00000491402 NLNQ9BYT8 704 aa20.7■□□□□ 0.9
VCPKMT-204ENST00000491402 STARD5Q9NSY2 213 aa20.7■□□□□ 0.9
VCPKMT-204ENST00000491402 RUVBL1Q9Y265 456 aaKnown RBP20.7■□□□□ 0.9
VCPKMT-204ENST00000491402 TMED5Q9Y3A6 229 aa20.7■□□□□ 0.9
VCPKMT-204ENST00000491402 TMEM150CB9EJG8 249 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 C4orf51C9J302 202 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 UBDO15205 165 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 ERI3O43414 337 aaKnown RBP20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 RAP1GDS1P52306 607 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 PLA2G16P53816 162 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 GABPB1Q06547 395 aaPredicted RBP20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 HES3Q5TGS1 186 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 COMMD6Q7Z4G1 85 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 METTL4Q8N3J2 472 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 ADAMTS14Q8WXS8 1223 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 RGMAQ96B86 450 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 C17orf62Q9BQA9 187 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 ZNF717Q9BY31 904 aaPredicted RBP20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 FGF21Q9NSA1 209 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 SCN3AQ9NY46 2000 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 AGRPO00253 132 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 TXNDC9O14530 226 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 CCKBRP32239 447 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 DIO3P55073 304 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 MAD2L1Q13257 205 aaPredicted RBP20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 C16orf72Q14CZ0 275 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 PRTGQ2VWP7 1150 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 TCTE1Q5JU00 501 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 CDCP2Q5VXM1 449 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 TMEM214Q6NUQ4 689 aaKnown RBP20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 TRIM40Q6P9F5 258 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 SPATA19Q7Z5L4 167 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 UBE3DQ7Z6J8 389 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 GAL3ST3Q96A11 431 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 CATSPER2Q96P56 530 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 KCNC2Q96PR1 638 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 NMUR2Q9GZQ4 415 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 AHSPQ9NZD4 102 aa20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 NOP53Q9NZM5 478 aaKnown RBP20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 G3BP2Q9UN86 482 aaKnown RBP20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 POLR3HQ9Y535 204 aaPredicted RBP20.69■□□□□ 0.9
VCPKMT-204ENST00000491402 KIF26BQ2KJY2 2108 aa20.68■□□□□ 0.9
VCPKMT-204ENST00000491402 URADA6NGE7 173 aa20.68■□□□□ 0.9
VCPKMT-204ENST00000491402 H3BMH7 237 aa20.68■□□□□ 0.9
VCPKMT-204ENST00000491402 RTCAO00442 366 aaKnown RBP20.68■□□□□ 0.9
VCPKMT-204ENST00000491402 MT-CO3P00414 261 aa20.68■□□□□ 0.9
VCPKMT-204ENST00000491402 NCF2P19878 526 aaPredicted RBP20.68■□□□□ 0.9
VCPKMT-204ENST00000491402 CSTF2P33240 577 aaKnown RBP eCLIP20.68■□□□□ 0.9
VCPKMT-204ENST00000491402 SNRPNP63162 240 aaKnown RBP20.68■□□□□ 0.9
VCPKMT-204ENST00000491402 RAE1P78406 368 aaKnown RBP20.68■□□□□ 0.9
VCPKMT-204ENST00000491402 GALNT18Q6P9A2 607 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms