RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 SLC6A12P48065 614 aa16.95■□□□□ 0.3
HMGN1-219ENST00000491183 HNMTP50135 292 aa16.95■□□□□ 0.3
HMGN1-219ENST00000491183 AP2B1P63010 937 aa16.95■□□□□ 0.3
HMGN1-219ENST00000491183 RGS1Q08116 209 aa16.95■□□□□ 0.3
HMGN1-219ENST00000491183 ELOAQ14241 798 aaKnown RBP16.95■□□□□ 0.3
HMGN1-219ENST00000491183 RBBP5Q15291 538 aaKnown RBP16.95■□□□□ 0.3
HMGN1-219ENST00000491183 NSDHLQ15738 373 aa16.95■□□□□ 0.3
HMGN1-219ENST00000491183 BTBD16Q32M84 506 aa16.95■□□□□ 0.3
HMGN1-219ENST00000491183 H3F3CQ6NXT2 135 aa16.95■□□□□ 0.3
HMGN1-219ENST00000491183 SYT10Q6XYQ8 523 aa16.95■□□□□ 0.3
HMGN1-219ENST00000491183 ADAMTSL2Q86TH1 951 aa16.95■□□□□ 0.3
HMGN1-219ENST00000491183 TSLPQ969D9 159 aa16.95■□□□□ 0.3
HMGN1-219ENST00000491183 TAAR6Q96RI8 345 aa16.95■□□□□ 0.3
HMGN1-219ENST00000491183 AICDAQ9GZX7 198 aa16.95■□□□□ 0.3
HMGN1-219ENST00000491183 RNF32Q9H0A6 362 aa16.95■□□□□ 0.3
HMGN1-219ENST00000491183 STMN3Q9NZ72 180 aa16.95■□□□□ 0.3
HMGN1-219ENST00000491183 ZGRF1Q86YA3 2104 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 TRAV17A0A0B4J275 112 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 A8MUI8 341 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 MAGEB17A8MXT2 336 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 C4orf51C9J302 202 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 WDR47O94967 919 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 LDLRP01130 860 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 FHP07954 510 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 C1GALT1C1LP0DN25 315 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 EDN3P14138 238 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 SLC12A2P55011 1212 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 PLTPP55058 493 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 RAB8AP61006 207 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 ILF2Q12905 390 aaKnown RBP16.94■□□□□ 0.3
HMGN1-219ENST00000491183 USP10Q14694 798 aaKnown RBP16.94■□□□□ 0.3
HMGN1-219ENST00000491183 ABRAXAS2Q15018 415 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 TGFBIQ15582 683 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 SFT2D3Q587I9 215 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 ABHD17BQ5VST6 288 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 ZNF324BQ6AW86 544 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-219ENST00000491183 FCRLBQ6BAA4 426 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 ZDHHC24Q6UX98 284 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 SLCO4C1Q6ZQN7 724 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 FRA10AC1Q70Z53 315 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 ABHD13Q7L211 337 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 CDKL2Q92772 493 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 TBC1D20Q96BZ9 403 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 GPR22Q99680 433 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 RBBP8Q99708 897 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 CPNE1Q99829 537 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 SLC5A6Q9Y289 635 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 SPTAN1Q13813 2472 aaKnown RBP16.94■□□□□ 0.3
HMGN1-219ENST00000491183 POLEQ07864 2286 aa16.94■□□□□ 0.3
HMGN1-219ENST00000491183 NCF1BA6NI72 391 aaPredicted RBP16.93■□□□□ 0.3
HMGN1-219ENST00000491183 NCF1CA8MVU1 366 aaPredicted RBP16.93■□□□□ 0.3
HMGN1-219ENST00000491183 UQCRHP07919 91 aa16.93■□□□□ 0.3
HMGN1-219ENST00000491183 GSTA2P09210 222 aa16.93■□□□□ 0.3
HMGN1-219ENST00000491183 CCDC166P0CW27 439 aa16.93■□□□□ 0.3
HMGN1-219ENST00000491183 NCF1P14598 390 aaPredicted RBP16.93■□□□□ 0.3
HMGN1-219ENST00000491183 GMPRP36959 345 aa16.93■□□□□ 0.3
HMGN1-219ENST00000491183 GP5P40197 560 aa16.93■□□□□ 0.3
HMGN1-219ENST00000491183 ZNF33BQ06732 778 aa16.93■□□□□ 0.3
HMGN1-219ENST00000491183 PAPD4Q6PIY7 484 aaKnown RBP16.93■□□□□ 0.3
HMGN1-219ENST00000491183 FAM180AQ6UWF9 173 aa16.93■□□□□ 0.3
HMGN1-219ENST00000491183 TRPV3Q8NET8 790 aa16.93■□□□□ 0.3
HMGN1-219ENST00000491183 M1APQ8TC57 530 aa16.93■□□□□ 0.3
HMGN1-219ENST00000491183 FBXO25Q8TCJ0 367 aa16.93■□□□□ 0.3
HMGN1-219ENST00000491183 ESAMQ96AP7 390 aa16.93■□□□□ 0.3
HMGN1-219ENST00000491183 TSPAN17Q96FV3 270 aa16.93■□□□□ 0.3
HMGN1-219ENST00000491183 NPAS2Q99743 824 aa16.93■□□□□ 0.3
HMGN1-219ENST00000491183 SLX1AQ9BQ83 275 aa16.93■□□□□ 0.3
HMGN1-219ENST00000491183 TMEM79Q9BSE2 394 aa16.93■□□□□ 0.3
HMGN1-219ENST00000491183 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.93■□□□□ 0.3
HMGN1-219ENST00000491183 UTP11Q9Y3A2 253 aaKnown RBP16.93■□□□□ 0.3
HMGN1-219ENST00000491183 SPTBN1Q01082 2364 aaKnown RBP16.93■□□□□ 0.3
HMGN1-219ENST00000491183 SVILO95425 2214 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 A1L4Q6 167 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 OR5H15A6NDH6 313 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 FAM227AF5H4B4 570 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 PRAMEF4O60810 478 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 B4GALT2O60909 372 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 H2AFYO75367 372 aaKnown RBP16.92■□□□□ 0.3
HMGN1-219ENST00000491183 FAM155BO75949 473 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 SERPINA6P08185 405 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 CD1DP15813 335 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 GNAZP19086 355 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 GGT5P36269 586 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 BTG2P78543 158 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 ACTN3Q08043 901 aaPredicted RBP16.92■□□□□ 0.3
HMGN1-219ENST00000491183 OR4D1Q15615 310 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 ZKSCAN8Q15776 578 aaPredicted RBP16.92■□□□□ 0.3
HMGN1-219ENST00000491183 EXT1Q16394 746 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 FBXO48Q5FWF7 155 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 TOR1AIP1Q5JTV8 583 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 ACER2Q5QJU3 275 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 PRAMEF9Q5VWM5 478 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 NIPAL1Q6NVV3 410 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 GPSM1Q86YR5 675 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 BCORP1Q8N888 145 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 UBXN10Q96LJ8 280 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 ZNF354BQ96LW1 612 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 MAGEB10Q96LZ2 347 aaPredicted RBP16.92■□□□□ 0.3
HMGN1-219ENST00000491183 LPAR4Q99677 370 aa16.92■□□□□ 0.3
HMGN1-219ENST00000491183 CLK4Q9HAZ1 481 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms