RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 PCDHGB6Q9Y5F9 930 aa18.55■□□□□ 0.56
SREBF1-216ENST00000490796 GABRR3A8MPY1 467 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 NDC80O14777 642 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 ZNF888P0CJ79 500 aaPredicted RBP18.54■□□□□ 0.56
SREBF1-216ENST00000490796 ESRRAP11474 423 aaPredicted RBP18.54■□□□□ 0.56
SREBF1-216ENST00000490796 AHRP35869 848 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 CD96P40200 585 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 HNF4AP41235 474 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 CA7P43166 264 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 ARL4CP56559 192 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 OLR1P78380 273 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 ALDH6A1Q02252 535 aaKnown RBP18.54■□□□□ 0.56
SREBF1-216ENST00000490796 ART3Q13508 389 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 RBBP5Q15291 538 aaKnown RBP18.54■□□□□ 0.56
SREBF1-216ENST00000490796 STRA8Q7Z7C7 330 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 TICAM1Q8IUC6 712 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 KLHL7Q8IXQ5 586 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 ARMC2Q8NEN0 867 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 TRPV3Q8NET8 790 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 NT5CQ8TCD5 201 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 NEIL2Q969S2 332 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 LRRC39Q96DD0 335 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 MOCOSQ96EN8 888 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 PTCHD1Q96NR3 888 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 OR4K3Q96R72 315 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 OLFM1Q99784 485 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 EGFL8Q99944 293 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 KCNE2Q9Y6J6 123 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 ABCA12Q86UK0 2595 aa18.54■□□□□ 0.56
SREBF1-216ENST00000490796 PRMT3O60678 531 aa18.53■□□□□ 0.56
SREBF1-216ENST00000490796 SLC19A2O60779 497 aa18.53■□□□□ 0.56
SREBF1-216ENST00000490796 SCTRP47872 440 aa18.53■□□□□ 0.56
SREBF1-216ENST00000490796 ST13P50502 369 aaKnown RBP18.53■□□□□ 0.56
SREBF1-216ENST00000490796 PGGT1BP53609 377 aa18.53■□□□□ 0.56
SREBF1-216ENST00000490796 SLC26A5P58743 744 aa18.53■□□□□ 0.56
SREBF1-216ENST00000490796 DR1Q01658 176 aa18.53■□□□□ 0.56
SREBF1-216ENST00000490796 KRTCAP3Q53RY4 240 aa18.53■□□□□ 0.56
SREBF1-216ENST00000490796 SPINK14Q6IE38 97 aa18.53■□□□□ 0.56
SREBF1-216ENST00000490796 TRMT10BQ6PF06 316 aaKnown RBP18.53■□□□□ 0.56
SREBF1-216ENST00000490796 RPTNQ6XPR3 784 aa18.53■□□□□ 0.56
SREBF1-216ENST00000490796 MRGPRGQ86SM5 289 aa18.53■□□□□ 0.56
SREBF1-216ENST00000490796 TMPRSS11BQ86T26 416 aa18.53■□□□□ 0.56
SREBF1-216ENST00000490796 THOC6Q86W42 341 aaKnown RBP18.53■□□□□ 0.56
SREBF1-216ENST00000490796 NKAPQ8N5F7 415 aaKnown RBP18.53■□□□□ 0.56
SREBF1-216ENST00000490796 CCDC120Q96HB5 630 aa18.53■□□□□ 0.56
SREBF1-216ENST00000490796 PDLIM5Q96HC4 596 aaKnown RBP18.53■□□□□ 0.56
SREBF1-216ENST00000490796 CAPZA3Q96KX2 299 aa18.53■□□□□ 0.56
SREBF1-216ENST00000490796 SIGLEC12Q96PQ1 595 aa18.53■□□□□ 0.56
SREBF1-216ENST00000490796 RHBGQ9H310 441 aa18.53■□□□□ 0.56
SREBF1-216ENST00000490796 CDCP1Q9H5V8 836 aa18.53■□□□□ 0.56
SREBF1-216ENST00000490796 PELI2Q9HAT8 420 aa18.53■□□□□ 0.56
SREBF1-216ENST00000490796 CLK4Q9HAZ1 481 aaKnown RBP18.53■□□□□ 0.56
SREBF1-216ENST00000490796 PCNX1Q96RV3 2341 aa18.52■□□□□ 0.56
SREBF1-216ENST00000490796 B3GALT4O96024 378 aa18.52■□□□□ 0.56
SREBF1-216ENST00000490796 RNH1P13489 461 aaKnown RBP18.52■□□□□ 0.56
SREBF1-216ENST00000490796 RAB8AP61006 207 aa18.52■□□□□ 0.56
SREBF1-216ENST00000490796 ZXDCQ2QGD7 858 aaPredicted RBP18.52■□□□□ 0.56
SREBF1-216ENST00000490796 FRA10AC1Q70Z53 315 aa18.52■□□□□ 0.56
SREBF1-216ENST00000490796 RPS19BP1Q86WX3 136 aaKnown RBP18.52■□□□□ 0.56
SREBF1-216ENST00000490796 LGI4Q8N135 537 aa18.52■□□□□ 0.56
SREBF1-216ENST00000490796 ZNF808Q8N4W9 903 aaPredicted RBP18.52■□□□□ 0.56
SREBF1-216ENST00000490796 MDS2Q8NDY4 140 aa18.52■□□□□ 0.56
SREBF1-216ENST00000490796 ITLN2Q8WWU7 325 aaPredicted RBP18.52■□□□□ 0.56
SREBF1-216ENST00000490796 VPS39Q96JC1 886 aa18.52■□□□□ 0.56
SREBF1-216ENST00000490796 PWWP2AQ96N64 755 aa18.52■□□□□ 0.56
SREBF1-216ENST00000490796 LRFN1Q9P244 771 aa18.52■□□□□ 0.56
SREBF1-216ENST00000490796 SLC22A14Q9Y267 594 aa18.52■□□□□ 0.56
SREBF1-216ENST00000490796 KLF2Q9Y5W3 355 aaPredicted RBP18.52■□□□□ 0.56
SREBF1-216ENST00000490796 H2AFYO75367 372 aaKnown RBP18.51■□□□□ 0.55
SREBF1-216ENST00000490796 TNFRSF8P28908 595 aa18.51■□□□□ 0.55
SREBF1-216ENST00000490796 REEP5Q00765 189 aa18.51■□□□□ 0.55
SREBF1-216ENST00000490796 MGAT5Q09328 741 aa18.51■□□□□ 0.55
SREBF1-216ENST00000490796 MAPKAPK3Q16644 382 aa18.51■□□□□ 0.55
SREBF1-216ENST00000490796 SLC25A25Q6KCM7 469 aa18.51■□□□□ 0.55
SREBF1-216ENST00000490796 NXPE4Q6UWF7 544 aa18.51■□□□□ 0.55
SREBF1-216ENST00000490796 SBSNQ6UWP8 590 aa18.51■□□□□ 0.55
SREBF1-216ENST00000490796 QSOX2Q6ZRP7 698 aa18.51■□□□□ 0.55
SREBF1-216ENST00000490796 GALNTL5Q7Z4T8 443 aa18.51■□□□□ 0.55
SREBF1-216ENST00000490796 ANKMY2Q8IV38 441 aa18.51■□□□□ 0.55
SREBF1-216ENST00000490796 UTP15Q8TED0 518 aaKnown RBP18.51■□□□□ 0.55
SREBF1-216ENST00000490796 FAR2Q96K12 515 aa18.51■□□□□ 0.55
SREBF1-216ENST00000490796 HES7Q9BYE0 225 aa18.51■□□□□ 0.55
SREBF1-216ENST00000490796 TSPAN10Q9H1Z9 355 aaPredicted RBP18.51■□□□□ 0.55
SREBF1-216ENST00000490796 TEX264Q9Y6I9 313 aa18.51■□□□□ 0.55
SREBF1-216ENST00000490796 LRBAP50851 2863 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 FAM95CA0A1B0GW59 222 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 NPEPPSL1A6NEC2 478 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 NPIPA5E9PKD4 350 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 CDK2AP1O14519 115 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 SP1P08047 785 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 ZNF37AP17032 561 aaPredicted RBP18.5■□□□□ 0.55
SREBF1-216ENST00000490796 IVDP26440 423 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 HNMTP50135 292 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 SMSP52788 366 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 ITGA8P53708 1063 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 SLC12A2P55011 1212 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 STEAP4Q687X5 459 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 MCEMP1Q8IX19 187 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 THAP3Q8WTV1 239 aaPredicted RBP18.5■□□□□ 0.55
SREBF1-216ENST00000490796 TMEM125Q96AQ2 219 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms