RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 SNX31Q8N9S9 440 aa16.47■□□□□ 0.23
SEC13-218ENST00000490283 STAG3L4Q8TBR4 150 aa16.47■□□□□ 0.23
SEC13-218ENST00000490283 CCT6BQ92526 530 aa16.47■□□□□ 0.23
SEC13-218ENST00000490283 EXT2Q93063 718 aa16.47■□□□□ 0.23
SEC13-218ENST00000490283 KIAA1191Q96A73 305 aa16.47■□□□□ 0.23
SEC13-218ENST00000490283 TBC1D20Q96BZ9 403 aa16.47■□□□□ 0.23
SEC13-218ENST00000490283 RBCK1Q9BYM8 510 aa16.47■□□□□ 0.23
SEC13-218ENST00000490283 PITHD1Q9GZP4 211 aaPredicted RBP16.47■□□□□ 0.23
SEC13-218ENST00000490283 NMRAL1Q9HBL8 299 aa16.47■□□□□ 0.23
SEC13-218ENST00000490283 FLNBO75369 2602 aaKnown RBP16.47■□□□□ 0.23
SEC13-218ENST00000490283 A0A088AWK7 358 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 KIF2AO00139 706 aaPredicted RBP16.46■□□□□ 0.23
SEC13-218ENST00000490283 CDC123O75794 336 aaPredicted RBP16.46■□□□□ 0.23
SEC13-218ENST00000490283 FAM155BO75949 473 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 SEC24DO94855 1032 aaPredicted RBP16.46■□□□□ 0.23
SEC13-218ENST00000490283 C1QAP02745 245 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 FHP07954 510 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 MYBL2P10244 700 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 ZNF10P21506 573 aaPredicted RBP16.46■□□□□ 0.23
SEC13-218ENST00000490283 TSFMP43897 325 aaKnown RBP16.46■□□□□ 0.23
SEC13-218ENST00000490283 HSPA7P48741 367 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 RAB8AP61006 207 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 ACTN3Q08043 901 aaPredicted RBP16.46■□□□□ 0.23
SEC13-218ENST00000490283 SLBPQ14493 270 aaKnown RBP eCLIP16.46■□□□□ 0.23
SEC13-218ENST00000490283 ABRAXAS2Q15018 415 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 EXT1Q16394 746 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 BTBD16Q32M84 506 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 C18orf21Q32NC0 220 aaPredicted RBP16.46■□□□□ 0.23
SEC13-218ENST00000490283 TOR1AIP1Q5JTV8 583 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 ABHD17BQ5VST6 288 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 TMIGD1Q6UXZ0 262 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 SLCO4C1Q6ZQN7 724 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 LANCL3Q6ZV70 420 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 CCDC91Q7Z6B0 441 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 ANKRD37Q7Z713 158 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 ANKRD53Q8N9V6 530 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 OR5T3Q8NGG3 340 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 UTP15Q8TED0 518 aaKnown RBP16.46■□□□□ 0.23
SEC13-218ENST00000490283 SEC16BQ96JE7 1060 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 FAR2Q96K12 515 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 UBXN10Q96LJ8 280 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 SLC6A16Q9GZN6 736 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 ASF1BQ9NVP2 202 aa16.46■□□□□ 0.23
SEC13-218ENST00000490283 CTAGE15A4D2H0 777 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 ANKDD1BA6NHY2 528 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 MAGEB17A8MXT2 336 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 TCP11X1B4DZS4 312 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 CHST10O43529 356 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 CCNT2O60583 730 aaKnown RBP16.45■□□□□ 0.22
SEC13-218ENST00000490283 AGFG2O95081 481 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 LTA4HP09960 611 aaKnown RBP16.45■□□□□ 0.22
SEC13-218ENST00000490283 CTAGE8P0CG41 777 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 ITGAMP11215 1152 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 TFEBP19484 476 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 SOX11P35716 441 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 GGT5P36269 586 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 OR4D1Q15615 310 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 UAP1Q16222 522 aaPredicted RBP16.45■□□□□ 0.22
SEC13-218ENST00000490283 PDK4Q16654 411 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 PAGE2BQ5JRK9 111 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 PLAG1Q6DJT9 500 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 CMC1Q7Z7K0 106 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 CTAGE6Q86UF2 777 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 CTAGE4Q8IX94 777 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.45■□□□□ 0.22
SEC13-218ENST00000490283 MMGT1Q8N4V1 131 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 PDPRQ8NCN5 879 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 SUN3Q8TAQ9 357 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 MRRFQ96E11 262 aaKnown RBP16.45■□□□□ 0.22
SEC13-218ENST00000490283 C19orf60Q96EN9 201 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 IMMP1LQ96LU5 166 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 MAGEB10Q96LZ2 347 aaPredicted RBP16.45■□□□□ 0.22
SEC13-218ENST00000490283 LPAR4Q99677 370 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 TMEM79Q9BSE2 394 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.45■□□□□ 0.22
SEC13-218ENST00000490283 EHD1Q9H4M9 534 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 ALG9Q9H6U8 611 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 ZDHHC18Q9NUE0 388 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 NUDT4Q9NZJ9 180 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 ABI3Q9P2A4 366 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 ACOT9Q9Y305 439 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 CSAG2Q9Y5P2 127 aa16.45■□□□□ 0.22
SEC13-218ENST00000490283 A0A087X1B8 175 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 TRAV17A0A0B4J275 112 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 IGHV3-20A0A0C4DH32 117 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 SUPT3HB4E1H0 165 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 SUPT3HO75486 399 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 SLC35E2BP0CK96 405 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 RNH1P13489 461 aaKnown RBP16.44■□□□□ 0.22
SEC13-218ENST00000490283 OR4D2P58180 307 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 OLR1P78380 273 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 RHAGQ02094 409 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 LAPTM5Q13571 262 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 EFTUD2Q15029 972 aaKnown RBP eCLIP16.44■□□□□ 0.225e-13■■■□□ 14.6
SEC13-218ENST00000490283 NR6A1Q15406 480 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 HIST2H2ACQ16777 129 aaPredicted RBP16.44■□□□□ 0.22
SEC13-218ENST00000490283 SFT2D3Q587I9 215 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 XKR6Q5GH73 641 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 HIST2H2AA3Q6FI13 130 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 FAM180AQ6UWF9 173 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms