RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 MLIPQ5VWP3 458 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 MED25Q71SY5 747 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 BANPQ8N9N5 519 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 KCT2Q8NC54 265 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 MYRIPQ8NFW9 859 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 OR2L5Q8NG80 312 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 OR7G3Q8NG95 312 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 RNF31Q96EP0 1072 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 SMIM10Q96HG1 83 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 OR1F2PQ96R84 312 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 UBL7Q96S82 380 aaPredicted RBP10.51□□□□□ -0.73
CPSF7-212ENST00000489728 SMC6Q96SB8 1091 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 RUFY1Q96T51 708 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 SPSB2Q99619 263 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 ROGDIQ9GZN7 287 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 STMN4Q9H169 189 aaPredicted RBP10.51□□□□□ -0.73
CPSF7-212ENST00000489728 NOL11Q9H8H0 719 aaKnown RBP10.51□□□□□ -0.73
CPSF7-212ENST00000489728 SSU72Q9NP77 194 aaKnown RBP10.51□□□□□ -0.73
CPSF7-212ENST00000489728 SEMA3GQ9NS98 782 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 CTSFQ9UBX1 484 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 EMCNQ9ULC0 261 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 ZNF490Q9ULM2 529 aaPredicted RBP10.51□□□□□ -0.73
CPSF7-212ENST00000489728 PTRH2Q9Y3E5 179 aaKnown RBP10.51□□□□□ -0.73
CPSF7-212ENST00000489728 ACTL7BQ9Y614 415 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 MRPS18BQ9Y676 258 aaKnown RBP10.51□□□□□ -0.73
CPSF7-212ENST00000489728 A0A1W2PQ72 361 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 LRIT2A6NDA9 550 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 SYNDIG1LA6NDD5 238 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 FOXE1O00358 373 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-212ENST00000489728 OR7A17O14581 309 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 RGS16O15492 202 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-212ENST00000489728 NKX2-8O15522 239 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 DLX3O60479 287 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 KLHL18O94889 574 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 SERPIND1P05546 499 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 ZGLP1P0C6A0 271 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 ZNF888P0CJ79 500 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-212ENST00000489728 PRKAR1AP10644 381 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 MMP11P24347 488 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 RPS18P62269 152 aaKnown RBP10.5□□□□□ -0.73
CPSF7-212ENST00000489728 CYP4F2P78329 520 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 ZNF33BQ06732 778 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 ASPHQ12797 758 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 HYAL2Q12891 473 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 TRAF3Q13114 568 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 IL10RAQ13651 578 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 ERV3-1Q14264 604 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 SLC9A5Q14940 896 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 BEND6Q5SZJ8 279 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-212ENST00000489728 TRIM40Q6P9F5 258 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 BORAQ6PGQ7 559 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 CHSY3Q70JA7 882 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 VN1R5Q7Z5H4 357 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 APLFQ8IW19 511 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-212ENST00000489728 SRRM1Q8IYB3 904 aaKnown RBP10.5□□□□□ -0.73
CPSF7-212ENST00000489728 OR9A4Q8NGU2 314 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 ZCCHC10Q8TBK6 192 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 STT3BQ8TCJ2 826 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 ADAMTS18Q8TE60 1221 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 UTP15Q8TED0 518 aaKnown RBP10.5□□□□□ -0.73
CPSF7-212ENST00000489728 ZNF473Q8WTR7 871 aaKnown RBP10.5□□□□□ -0.73
CPSF7-212ENST00000489728 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-212ENST00000489728 APOBEC4Q8WW27 367 aaKnown RBP10.5□□□□□ -0.73
CPSF7-212ENST00000489728 TTC9Q92623 222 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 ATP6V1E2Q96A05 226 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 MIEF2Q96C03 454 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 MS4A6EQ96DS6 147 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 MOCOSQ96EN8 888 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 CMTM7Q96FZ5 175 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 PGM2Q96G03 612 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 CRELD1Q96HD1 420 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 KCNC2Q96PR1 638 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 ZNF382Q96SR6 550 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 CENPKQ9BS16 269 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 NPLQ9BXD5 320 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-212ENST00000489728 REXO4Q9GZR2 422 aaKnown RBP10.5□□□□□ -0.73
CPSF7-212ENST00000489728 ZBTB26Q9HCK0 441 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 TRPC4Q9UBN4 977 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 TUBD1Q9UJT1 453 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 PLLPQ9Y342 182 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 MRPS2Q9Y399 296 aaKnown RBP10.5□□□□□ -0.73
CPSF7-212ENST00000489728 NAALAD2Q9Y3Q0 740 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 MAU2Q9Y6X3 613 aa10.5□□□□□ -0.73
CPSF7-212ENST00000489728 MGAQ8IWI9 3026 aa10.49□□□□□ -0.73
CPSF7-212ENST00000489728 CDC14CA4D256 554 aa10.49□□□□□ -0.73
CPSF7-212ENST00000489728 LRRC14BA6NHZ5 514 aa10.49□□□□□ -0.73
CPSF7-212ENST00000489728 G3V2L1 256 aa10.49□□□□□ -0.73
CPSF7-212ENST00000489728 CNOT3O75175 753 aaKnown RBP10.49□□□□□ -0.73
CPSF7-212ENST00000489728 UMODP07911 640 aa10.49□□□□□ -0.73
CPSF7-212ENST00000489728 MYZAPP0CAP1 466 aa10.49□□□□□ -0.73
CPSF7-212ENST00000489728 SFTPCP11686 197 aa10.49□□□□□ -0.73
CPSF7-212ENST00000489728 CPA3P15088 417 aa10.49□□□□□ -0.73
CPSF7-212ENST00000489728 IL1RNP18510 177 aa10.49□□□□□ -0.73
CPSF7-212ENST00000489728 HNRNPH1P31943 449 aaKnown RBP10.49□□□□□ -0.73
CPSF7-212ENST00000489728 RRADP55042 308 aa10.49□□□□□ -0.73
CPSF7-212ENST00000489728 PKNOX1P55347 436 aa10.49□□□□□ -0.73
CPSF7-212ENST00000489728 CLCQ05315 142 aa10.49□□□□□ -0.73
CPSF7-212ENST00000489728 LCP2Q13094 533 aa10.49□□□□□ -0.73
CPSF7-212ENST00000489728 DEFB134Q4QY38 66 aa10.49□□□□□ -0.73
CPSF7-212ENST00000489728 TNFAIP8L3Q5GJ75 292 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms