RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 GTPBP2Q9BX10 602 aaKnown RBP13.51□□□□□ -0.25
VPS26A-205ENST00000489656 DPY30Q9C005 99 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 CLMPQ9H6B4 373 aa13.51□□□□□ -0.25
VPS26A-205ENST00000489656 LOC100653049A0A140TA62 436 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 B2RBV5 119 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 SH3BGRLO75368 114 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 DNAJC8O75937 253 aaPredicted RBP13.5□□□□□ -0.25
VPS26A-205ENST00000489656 KRT34O76011 436 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 ANXA4P09525 319 aaPredicted RBP13.5□□□□□ -0.25
VPS26A-205ENST00000489656 SLC35G6P0C7Q6 338 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 ZNF806P0C7X5 589 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 CKMT1AP12532 417 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 PRPS1L1P21108 318 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 CD1CP29017 333 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 CPOXP36551 454 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 CPA2P48052 419 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 RAP1GDS1P52306 607 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 GFERP55789 205 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 NME5P56597 212 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 KCNK10P57789 538 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 STXBP1P61764 594 aaKnown RBP13.5□□□□□ -0.25
VPS26A-205ENST00000489656 CYP4F3Q08477 520 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 ZNF763Q0D2J5 394 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 CLPPQ16740 277 aaPredicted RBP13.5□□□□□ -0.25
VPS26A-205ENST00000489656 DPY19L1Q2PZI1 675 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 INAVAQ3KP66 663 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 ZC3H12BQ5HYM0 836 aaKnown RBP13.5□□□□□ -0.25
VPS26A-205ENST00000489656 RINLQ6ZS11 566 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 UBE3DQ7Z6J8 389 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 NUDT13Q86X67 352 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 CAMKVQ8NCB2 501 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 OR2L5Q8NG80 312 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 WDR48Q8TAF3 677 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 SLC13A3Q8WWT9 602 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 GAL3ST3Q96A11 431 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 TESCQ96BS2 214 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 KLHL29Q96CT2 875 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 MS4A6EQ96DS6 147 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 SPDL1Q96EA4 605 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 MAP3K3Q99759 626 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 BTBD10Q9BSF8 475 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 REXO4Q9GZR2 422 aaKnown RBP13.5□□□□□ -0.25
VPS26A-205ENST00000489656 KCNH6Q9H252 994 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 SMOC1Q9H4F8 434 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 DDX31Q9H8H2 851 aaKnown RBP13.5□□□□□ -0.25
VPS26A-205ENST00000489656 EFCAB1Q9HAE3 211 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 PRM3Q9NNZ6 103 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 MYNNQ9NPC7 610 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 LHX9Q9NQ69 397 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 TAS2R1Q9NYW7 299 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 BAIAP2L1Q9UHR4 511 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 NDUFAF1Q9Y375 327 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 DMDP11532 3685 aa13.5□□□□□ -0.25
VPS26A-205ENST00000489656 SCN2AQ99250 2005 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 A0A0J9YVX5 310 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 A0A1W2PP18 115 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 LNP1A1A4G5 178 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 SLC9B1P1A6NJY1 282 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 SAP18O00422 153 aaKnown RBP13.49□□□□□ -0.25
VPS26A-205ENST00000489656 NR5A2O00482 541 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 FBP2O00757 339 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 EEDO75530 441 aaKnown RBP13.49□□□□□ -0.25
VPS26A-205ENST00000489656 KLHL18O94889 574 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 SCELO95171 688 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 SERPIND1P05546 499 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 SMIM10L1P0DMW3 83 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 CAPN3P20807 821 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 TPP2P29144 1249 aaPredicted RBP13.49□□□□□ -0.25
VPS26A-205ENST00000489656 GRK6P43250 576 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 DUSP3P51452 185 aaPredicted RBP13.49□□□□□ -0.25
VPS26A-205ENST00000489656 ATXN3P54252 364 aaPredicted RBP13.49□□□□□ -0.25
VPS26A-205ENST00000489656 TRA2BP62995 288 aaKnown RBP13.49□□□□□ -0.25
VPS26A-205ENST00000489656 CFHR1Q03591 330 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 ACTN3Q08043 901 aaPredicted RBP13.49□□□□□ -0.25
VPS26A-205ENST00000489656 TGM3Q08188 693 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 TCF15Q12870 199 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 CCDC6Q16204 474 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 DNAL1Q4LDG9 190 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 TOR1AIP1Q5JTV8 583 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 NKAIN2Q5VXU1 208 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 REP15Q6BDI9 236 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 OR4C11Q6IEV9 310 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 TCEAL6Q6IPX3 200 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 GUSBP11Q6P575 273 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 ABHD17CQ6PCB6 329 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 HACD2Q6Y1H2 254 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 MSANTD1Q6ZTZ1 278 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 IKBIPQ70UQ0 350 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 PRSS42Q7Z5A4 293 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 DNAJC22Q8N4W6 341 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 ZNF655Q8N720 491 aaPredicted RBP13.49□□□□□ -0.25
VPS26A-205ENST00000489656 RBM15BQ8NDT2 890 aaKnown RBP13.49□□□□□ -0.25
VPS26A-205ENST00000489656 NCSTNQ92542 709 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 TCEAL3Q969E4 200 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 RERGQ96A58 199 aaPredicted RBP13.49□□□□□ -0.25
VPS26A-205ENST00000489656 RCN3Q96D15 328 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 SMIM10Q96HG1 83 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 ZNF285Q96NJ3 590 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 TGM7Q96PF1 710 aa13.49□□□□□ -0.25
VPS26A-205ENST00000489656 TSSK3Q96PN8 268 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms