RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 HSD17B3P37058 310 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 KCNC1P48547 511 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 CCR8P51685 355 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 RPL7AP62424 266 aaKnown RBP6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 PPIAP62937 165 aaKnown RBP6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 PDCLQ13371 301 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 SNX1Q13596 522 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 PTK6Q13882 451 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 PTPN20Q4JDL3 420 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 CEP85LQ5SZL2 805 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 CLEC2AQ6UVW9 174 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 TMEM205Q6UW68 189 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 KIAA0408Q6ZU52 694 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 SH2D5Q6ZV89 423 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 RETREG3Q86VR2 466 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 ZDHHC17Q8IUH5 632 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 DNAJC22Q8N4W6 341 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 C1orf54Q8WWF1 131 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 TRIB1Q96RU8 372 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 CPXM1Q96SM3 734 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 NPY6RQ99463 290 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 CNPY3Q9BT09 278 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 MAK16Q9BXY0 300 aaKnown RBP6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 CENPHQ9H3R5 247 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 METTL17Q9H7H0 456 aaPredicted RBP6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 MANSC1Q9H8J5 431 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 TRIM39Q9HCM9 518 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 METTL5Q9NRN9 209 aaKnown RBP6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 PDP1Q9P0J1 537 aaPredicted RBP6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 PSMD13Q9UNM6 376 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 EFR3BQ9Y2G0 817 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 SNX24Q9Y343 169 aa6.92□□□□□ -1.3
EXOSC3-206ENST00000489414 TCRBV5S1A1TA0A578 114 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 TCRBV7S2A1N4TA0A589 114 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 FAM166BA8MTA8 275 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 SLC16A5O15375 505 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 PRPSAP2O60256 369 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 SUSD5O60279 629 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 ZNF354AO60765 605 aaPredicted RBP6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 DAB1O75553 588 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 SEC24DO94855 1032 aaPredicted RBP6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 EPPINO95925 133 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 PLAUP00749 431 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 TGFAP01135 160 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 DANCRP0C864 163 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 VCLP18206 1134 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 ENDOUP21128 410 aaKnown RBP6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 GPD1P21695 349 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 CTSSP25774 331 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 DPP4P27487 766 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 RFC1P35251 1148 aaPredicted RBP6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 PCK1P35558 622 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 RPL21P46778 160 aaKnown RBP6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 CPA2P48052 419 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 STC1P52823 247 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 ITGA8P53708 1063 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 WDR4P57081 412 aaKnown RBP6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 TAS2R40P59535 323 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 GPR85P60893 370 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 AP1S1P61966 158 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 TAZQ16635 292 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 KRT71Q3SY84 523 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 YOD1Q5VVQ6 348 aaPredicted RBP6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 RWDD4Q6NW29 188 aaKnown RBP6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 TTC27Q6P3X3 843 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 DRICH1Q6PGQ1 229 aaPredicted RBP6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 TRMT10CQ7L0Y3 403 aaKnown RBP6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 LUZP2Q86TE4 346 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 CPNE8Q86YQ8 564 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 LACC1Q8IV20 430 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 MAP7D3Q8IWC1 876 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 SCUBE1Q8IWY4 988 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 FBXW8Q8N3Y1 598 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 WDTC1Q8N5D0 677 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 SLC5A8Q8N695 610 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 KCTD6Q8NC69 237 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 FBF1Q8TES7 1133 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 ATP6V1G3Q96LB4 118 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 BTBD9Q96Q07 612 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 JMJD8Q96S16 334 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 HEMGNQ9BXL5 484 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 ZWILCHQ9H900 591 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 DTLQ9NZJ0 730 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 CWC15Q9P013 229 aaKnown RBP6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 TMEFF2Q9UIK5 374 aaPredicted RBP6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 ANAPC5Q9UJX4 755 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 PLCL2Q9UPR0 1127 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 ZNF148Q9UQR1 794 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 PPIL1Q9Y3C6 166 aa6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 MAGED1Q9Y5V3 778 aaPredicted RBP6.91□□□□□ -1.3
EXOSC3-206ENST00000489414 hCG_1818297A0A087WSY0 165 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 ACOT7O00154 380 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 SOCS5O75159 536 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 PPP1R3DO95685 299 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 KRT14P02533 472 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 AMPD1P23109 780 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 TPP2P29144 1249 aaPredicted RBP6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 ATP5DP30049 168 aa6.9□□□□□ -1.3
EXOSC3-206ENST00000489414 ECHS1P30084 290 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms