RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 PGAM1P18669 254 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 HIST1H2ADP20671 130 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 JAK1P23458 1154 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 TPP2P29144 1249 aaPredicted RBP11.63□□□□□ -0.55
CPSF3-204ENST00000489403 CCR8P51685 355 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 PGGT1BP53609 377 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 HSF1Q00613 529 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 DEFB134Q4QY38 66 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 CATSPEREQ5SY80 951 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 RNASEH2BQ5TBB1 312 aaKnown RBP11.63□□□□□ -0.55
CPSF3-204ENST00000489403 DUPD1Q68J44 220 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 CHERPQ8IWX8 916 aaKnown RBP11.63□□□□□ -0.55
CPSF3-204ENST00000489403 PPIL6Q8IXY8 311 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 ZNF295-AS1Q8N0V1 137 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 HORMAD2Q8N7B1 307 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 OR56A3Q8NH54 315 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 NT5CQ8TCD5 201 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 MTFMTQ96DP5 389 aaKnown RBP11.63□□□□□ -0.55
CPSF3-204ENST00000489403 SNF8Q96H20 258 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 HIST1H2AHQ96KK5 128 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 HIST1H2AJQ99878 128 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 TRIM51Q9BSJ1 452 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 H2AFJQ9BTM1 129 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 SLC17A6Q9P2U8 582 aa11.63□□□□□ -0.55
CPSF3-204ENST00000489403 DCHS2Q6V1P9 2916 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 SAGE2PA6NJ88 616 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 ASNA1O43681 348 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 NME2P1O60361 137 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 BANF1O75531 89 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 SLC25A12O75746 678 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 AHSGP02765 367 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 SERPIND1P05546 499 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 ZNF888P0CJ79 500 aaPredicted RBP11.62□□□□□ -0.55
CPSF3-204ENST00000489403 ABOP16442 354 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 NME2P22392 152 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 KIR3DL1P43629 444 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 BTG2P78543 158 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 CCZ1BP86790 482 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 CCZ1P86791 482 aaPredicted RBP11.62□□□□□ -0.55
CPSF3-204ENST00000489403 PWP1Q13610 501 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 MAPKAPK3Q16644 382 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 RNFT1Q5M7Z0 435 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 QSOX2Q6ZRP7 698 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 FGD2Q7Z6J4 655 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 STRA8Q7Z7C7 330 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 RPS19BP1Q86WX3 136 aaKnown RBP11.62□□□□□ -0.55
CPSF3-204ENST00000489403 ZNF227Q86WZ6 799 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 LRRC8AQ8IWT6 810 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 CNTN4Q8IWV2 1026 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 GHDCQ8N2G8 530 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 CPSF7Q8N684 471 aaKnown RBP11.62□□□□□ -0.55
CPSF3-204ENST00000489403 UTP15Q8TED0 518 aaKnown RBP11.62□□□□□ -0.55
CPSF3-204ENST00000489403 AGAP11Q8TF27 550 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 NEIL2Q969S2 332 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 PBKQ96KB5 322 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 ARL15Q9NXU5 204 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 ZFP69BQ9UJL9 534 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 PKDREJQ9NTG1 2253 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 CACNA1CQ13936 2221 aa11.62□□□□□ -0.55
CPSF3-204ENST00000489403 PCNX1Q96RV3 2341 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 ADGRG4Q8IZF6 3080 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 CTAGE15A4D2H0 777 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 PABPN1LA6NDY0 278 aaKnown RBP11.61□□□□□ -0.55
CPSF3-204ENST00000489403 PGRMC1O00264 195 aaKnown RBP11.61□□□□□ -0.55
CPSF3-204ENST00000489403 CDK2AP1O14519 115 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 B4GALT2O60909 372 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 GUCA1CO95843 209 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 ZNF24P17028 368 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 MAOAP21397 527 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 SCTRP47872 440 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 FNTAP49354 379 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 AP1S2P56377 157 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 MLF1P58340 268 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 IL2P60568 153 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 SKP1P63208 163 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 REEP5Q00765 189 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 RGS1Q08116 209 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 GTF3C1Q12789 2109 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 HYAL2Q12891 473 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 PDAP1Q13442 181 aaKnown RBP11.61□□□□□ -0.55
CPSF3-204ENST00000489403 SPANXN3Q5MJ09 141 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 NIPAL1Q6NVV3 410 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 KIAA0408Q6ZU52 694 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 ABHD13Q7L211 337 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 CTAGE6Q86UF2 777 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 DOLPP1Q86YN1 238 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 CYP4X1Q8N118 509 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 ANKRD53Q8N9V6 530 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 GABPB2Q8TAK5 448 aaPredicted RBP11.61□□□□□ -0.55
CPSF3-204ENST00000489403 GRK7Q8WTQ7 553 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 SLC5A11Q8WWX8 675 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 FBXL8Q96CD0 374 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 CERS2Q96G23 380 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 PTCHD1Q96NR3 888 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 OLFM1Q99784 485 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 SLC6A16Q9GZN6 736 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 TRIM45Q9H8W5 580 aaPredicted RBP11.61□□□□□ -0.55
CPSF3-204ENST00000489403 PLAC1Q9HBJ0 212 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 GPAMQ9HCL2 828 aa11.61□□□□□ -0.55
CPSF3-204ENST00000489403 NECTIN3Q9NQS3 549 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms