RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 LRRC46Q96FV0 321 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 CCDC138Q96M89 665 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 SECISBP2Q96T21 854 aaKnown RBP8.53□□□□□ -1.04
SSBP1-212ENST00000489378 MACROD1Q9BQ69 325 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 TTTY12Q9BZ98 90 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 HSD3B7Q9H2F3 369 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 MRPS30Q9NP92 439 aaKnown RBP8.53□□□□□ -1.04
SSBP1-212ENST00000489378 LANCL2Q9NS86 450 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 CTTNBP2NLQ9P2B4 639 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 ADGRE2Q9UHX3 823 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 TRHDEQ9UKU6 1024 aa8.53□□□□□ -1.04
SSBP1-212ENST00000489378 TTC7AQ9ULT0 858 aaPredicted RBP8.53□□□□□ -1.04
SSBP1-212ENST00000489378 HSPB2A8KAH6 182 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 MAGEB17A8MXT2 336 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 G3V3Y1 287 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 ACOT7O00154 380 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 AQP7O14520 342 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 TXNDC9O14530 226 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 DVL2O14641 736 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 HAT1O14929 419 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 CST8O60676 142 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 RDH16O75452 317 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 GLSO94925 669 aaPredicted RBP8.52□□□□□ -1.05
SSBP1-212ENST00000489378 GOSR1O95249 250 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 TUBB4AP04350 444 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 TPH1P17752 444 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 PSMB4P28070 264 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 FOXN2P32314 431 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 MAGEA5P43359 124 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 MPP1Q00013 466 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 NAA25Q14CX7 972 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 HSPB2Q16082 182 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 KRTAP24-1Q3LI83 254 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 TTC23LQ6PF05 361 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 SUSD1Q6UWL2 747 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 BZW1Q7L1Q6 419 aaKnown RBP8.52□□□□□ -1.05
SSBP1-212ENST00000489378 PCGF5Q86SE9 256 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 PDSS2Q86YH6 399 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 KRT222Q8N1A0 295 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 TMEM251Q8N6I4 163 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 PSD4Q8NDX1 1056 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 TNIP2Q8NFZ5 429 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 PIGTQ969N2 578 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 HAUS1Q96CS2 278 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 CAPZA3Q96KX2 299 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 QKIQ96PU8 341 aaKnown RBP eCLIP8.52□□□□□ -1.05
SSBP1-212ENST00000489378 TBL1YQ9BQ87 522 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 KCMF1Q9P0J7 381 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 SPRR3Q9UBC9 169 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 MTRF1LQ9UGC7 380 aaKnown RBP8.52□□□□□ -1.05
SSBP1-212ENST00000489378 FOXD3Q9UJU5 478 aaPredicted RBP8.52□□□□□ -1.05
SSBP1-212ENST00000489378 DRG1Q9Y295 367 aaKnown RBP8.52□□□□□ -1.05
SSBP1-212ENST00000489378 R3HDM2Q9Y2K5 976 aaKnown RBP8.52□□□□□ -1.05
SSBP1-212ENST00000489378 NPFFR2Q9Y5X5 522 aa8.52□□□□□ -1.05
SSBP1-212ENST00000489378 CCDC162PA2VCL2 907 aa8.51□□□□□ -1.05
SSBP1-212ENST00000489378 KDM4EB2RXH2 506 aaPredicted RBP8.51□□□□□ -1.05
SSBP1-212ENST00000489378 ITGA10O75578 1167 aa8.51□□□□□ -1.05
SSBP1-212ENST00000489378 APOA4P06727 396 aa8.51□□□□□ -1.05
SSBP1-212ENST00000489378 EZRP15311 586 aaKnown RBP8.51□□□□□ -1.05
SSBP1-212ENST00000489378 ENDOUP21128 410 aaKnown RBP8.51□□□□□ -1.05
SSBP1-212ENST00000489378 MSNP26038 577 aaKnown RBP8.51□□□□□ -1.05
SSBP1-212ENST00000489378 AOAHP28039 575 aa8.51□□□□□ -1.05
SSBP1-212ENST00000489378 DMTNQ08495 405 aa8.51□□□□□ -1.05
SSBP1-212ENST00000489378 ARSJQ5FYB0 599 aaPredicted RBP8.51□□□□□ -1.05
SSBP1-212ENST00000489378 C10orf62Q5T681 223 aaPredicted RBP8.51□□□□□ -1.05
SSBP1-212ENST00000489378 WLSQ5T9L3 541 aa8.51□□□□□ -1.05
SSBP1-212ENST00000489378 HEPHL1Q6MZM0 1159 aa8.51□□□□□ -1.05
SSBP1-212ENST00000489378 RGS9BPQ6ZS82 235 aa8.51□□□□□ -1.05
SSBP1-212ENST00000489378 VN1R4Q7Z5H5 301 aa8.51□□□□□ -1.05
SSBP1-212ENST00000489378 SLC22A16Q86VW1 577 aa8.51□□□□□ -1.05
SSBP1-212ENST00000489378 KIF18BQ86Y91 864 aa8.51□□□□□ -1.05
SSBP1-212ENST00000489378 Q8N3U1 123 aa8.51□□□□□ -1.05
SSBP1-212ENST00000489378 RAB42Q8N4Z0 105 aa8.51□□□□□ -1.05
SSBP1-212ENST00000489378 TMEM156Q8N614 296 aa8.51□□□□□ -1.05
SSBP1-212ENST00000489378 NFAM1Q8NET5 270 aaPredicted RBP8.51□□□□□ -1.05
SSBP1-212ENST00000489378 PPP1R14CQ8TAE6 165 aa8.51□□□□□ -1.05
SSBP1-212ENST00000489378 PEX11GQ96HA9 241 aa8.51□□□□□ -1.05
SSBP1-212ENST00000489378 DEFB126Q9BYW3 111 aa8.51□□□□□ -1.05
SSBP1-212ENST00000489378 ARNT2Q9HBZ2 717 aa8.51□□□□□ -1.05
SSBP1-212ENST00000489378 NOP53Q9NZM5 478 aaKnown RBP8.51□□□□□ -1.05
SSBP1-212ENST00000489378 MEGF8Q7Z7M0 2845 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 TRBV11-1A0A0K0K1C0 115 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 ATP6AP2A0A1C7CYW4 349 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 ZNF860A6NHJ4 632 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 SAGE2PA6NJ88 616 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 CES2O00748 559 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 ATP6AP2O75787 350 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 PKMP14618 531 aaKnown RBP8.5□□□□□ -1.05
SSBP1-212ENST00000489378 PTMSP20962 102 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 RBL1P28749 1068 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 RPA3P35244 121 aaPredicted RBP8.5□□□□□ -1.05
SSBP1-212ENST00000489378 CDKN2BP42772 138 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 MAN2A2P49641 1150 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 SORDQ00796 357 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 RUNX1T1Q06455 604 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 TSTA3Q13630 321 aaPredicted RBP8.5□□□□□ -1.05
SSBP1-212ENST00000489378 POU6F1Q14863 301 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 NFKBIBQ15653 356 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 CCDC38Q502W7 563 aa8.5□□□□□ -1.05
SSBP1-212ENST00000489378 ICE2Q659A1 982 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms