RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 ZNF678Q5SXM1 525 aa17.68■□□□□ 0.42
PTCD3-217ENST00000488801 MLIPQ5VWP3 458 aa17.68■□□□□ 0.42
PTCD3-217ENST00000488801 ZYG11AQ6WRX3 759 aa17.68■□□□□ 0.42
PTCD3-217ENST00000488801 OR52B6Q8NGF0 335 aa17.68■□□□□ 0.42
PTCD3-217ENST00000488801 OR9A4Q8NGU2 314 aa17.68■□□□□ 0.42
PTCD3-217ENST00000488801 ZNF473Q8WTR7 871 aaKnown RBP17.68■□□□□ 0.42
PTCD3-217ENST00000488801 CATSPER2Q96P56 530 aa17.68■□□□□ 0.42
PTCD3-217ENST00000488801 MS4A8Q9BY19 250 aa17.68■□□□□ 0.42
PTCD3-217ENST00000488801 KLHL31Q9H511 634 aa17.68■□□□□ 0.42
PTCD3-217ENST00000488801 GPN3Q9UHW5 284 aaPredicted RBP17.68■□□□□ 0.42
PTCD3-217ENST00000488801 GRID1Q9ULK0 1009 aa17.68■□□□□ 0.42
PTCD3-217ENST00000488801 A0A1B0GTL3 188 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 LRIT2A6NDA9 550 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 H0YIV9 168 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 COPEO14579 308 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 ERLIN1O75477 346 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 KLHL18O94889 574 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 PRKAR1AP10644 381 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 SERPINB1P30740 379 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 CCT5P48643 541 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 EFNA3P52797 238 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 UNC50Q53HI1 259 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 MED27Q6P2C8 311 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 LRIG3Q6UXM1 1119 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 RPS27LQ71UM5 84 aaKnown RBP17.67■□□□□ 0.42
PTCD3-217ENST00000488801 SLC22A9Q8IVM8 553 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 ZC3H7AQ8IWR0 971 aaKnown RBP17.67■□□□□ 0.42
PTCD3-217ENST00000488801 SHISA5Q8N114 240 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 OR7G3Q8NG95 312 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 RDH11Q8TC12 318 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 STT3BQ8TCJ2 826 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 UBE2E3Q969T4 207 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 GAL3ST3Q96A11 431 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 MS4A6EQ96DS6 147 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 MMABQ96EY8 250 aaPredicted RBP17.67■□□□□ 0.42
PTCD3-217ENST00000488801 NOL11Q9H8H0 719 aaKnown RBP17.67■□□□□ 0.42
PTCD3-217ENST00000488801 ANKHQ9HCJ1 492 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 MKKSQ9NPJ1 570 aaPredicted RBP17.67■□□□□ 0.42
PTCD3-217ENST00000488801 C14orf105Q9NVL8 296 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 ZNF282Q9UDV7 671 aaPredicted RBP17.67■□□□□ 0.42
PTCD3-217ENST00000488801 ZNF225Q9UK10 706 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 PPT2Q9UMR5 302 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 PTRH2Q9Y3E5 179 aaKnown RBP17.67■□□□□ 0.42
PTCD3-217ENST00000488801 NAALAD2Q9Y3Q0 740 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 ANGPTL3Q9Y5C1 460 aa17.67■□□□□ 0.42
PTCD3-217ENST00000488801 ZGLP1P0C6A0 271 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 ZNF888P0CJ79 500 aaPredicted RBP17.66■□□□□ 0.42
PTCD3-217ENST00000488801 IMPDH1P20839 514 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 FOLR3P41439 243 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 AVPR1BP47901 424 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 ERV3-1Q14264 604 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 SSPNQ14714 243 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 SYT16Q17RD7 645 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 LINC00303Q3SY05 128 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 KRT71Q3SY84 523 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 NIPAL1Q6NVV3 410 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 MED25Q71SY5 747 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 ABHD13Q7L211 337 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 SRRM1Q8IYB3 904 aaKnown RBP17.66■□□□□ 0.42
PTCD3-217ENST00000488801 WDR20Q8TBZ3 569 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 COL26A1Q96A83 441 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 NACC2Q96BF6 587 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 C12orf65Q9H3J6 166 aaKnown RBP17.66■□□□□ 0.42
PTCD3-217ENST00000488801 ACTR8Q9H981 624 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 SENP1Q9P0U3 644 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 POLHQ9Y253 713 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 PLLPQ9Y342 182 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 RNF11Q9Y3C5 154 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 SMG1Q96Q15 3661 aaKnown RBP17.66■□□□□ 0.42
PTCD3-217ENST00000488801 CNTRLQ7Z7A1 2325 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 SPTA1P02549 2419 aa17.66■□□□□ 0.42
PTCD3-217ENST00000488801 A0A1W2PQ72 361 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 CDC14CA4D256 554 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 URADA6NGE7 173 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 ANKDD1BA6NHY2 528 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 SGK494L7N484 410 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 ERVH48-1M5A8F1 160 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 TYROBPO43914 113 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 RDH16O75452 317 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 CLDN9O95484 217 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 PIK3CBP42338 1070 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 CCNG1P51959 295 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 STXBP1P61764 594 aaKnown RBP17.65■□□□□ 0.42
PTCD3-217ENST00000488801 MAT1AQ00266 395 aaKnown RBP17.65■□□□□ 0.42
PTCD3-217ENST00000488801 KLC1Q07866 573 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 TBR1Q16650 682 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 HIST2H2ACQ16777 129 aaPredicted RBP17.65■□□□□ 0.42
PTCD3-217ENST00000488801 TOR1AIP1Q5JTV8 583 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 HIST2H2AA3Q6FI13 130 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 PPP1R32Q7Z5V6 425 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 MRGPREQ86SM8 312 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 OR2L5Q8NG80 312 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 THAP4Q8WY91 577 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 CCDC126Q96EE4 140 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 QRFPRQ96P65 431 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 GSTO2Q9H4Y5 243 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 CLK4Q9HAZ1 481 aaKnown RBP17.65■□□□□ 0.42
PTCD3-217ENST00000488801 SEMA4BQ9NPR2 832 aaPredicted RBP17.65■□□□□ 0.42
PTCD3-217ENST00000488801 DMRT3Q9NQL9 472 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 TRPC4Q9UBN4 977 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms