RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 KLHL10Q6JEL2 608 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 FIP1L1Q6UN15 594 aaKnown RBP2.78□□□□□ -1.96
CD46-215ENST00000488596 SIGLEC15Q6ZMC9 328 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 CCDC91Q7Z6B0 441 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 CCDC83Q8IWF9 413 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 CLYBLQ8N0X4 340 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 NUP93Q8N1F7 819 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 SMYD1Q8NB12 490 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 TEKT1Q969V4 418 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 ANKRD9Q96BM1 317 aaPredicted RBP2.78□□□□□ -1.96
CD46-215ENST00000488596 PRMT1Q99873 361 aaKnown RBP2.78□□□□□ -1.96
CD46-215ENST00000488596 IDI2Q9BXS1 227 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 TDRD1Q9BXT4 1180 aaKnown RBP2.78□□□□□ -1.96
CD46-215ENST00000488596 SLC39A8Q9C0K1 460 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 ZNF350Q9GZX5 532 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 C2orf40Q9H1Z8 148 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 CUEDC2Q9H467 287 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 DPEP2Q9H4A9 486 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 ABCB8Q9NUT2 735 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 TMEM161AQ9NX61 479 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 POLKQ9UBT6 870 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 FBXL5Q9UKA1 691 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 FBXL4Q9UKA2 621 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 PLCL2Q9UPR0 1127 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 LIPT1Q9Y234 373 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 EXOGQ9Y2C4 368 aaKnown RBP2.78□□□□□ -1.96
CD46-215ENST00000488596 SMAD5-AS1Q9Y6J3 95 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 A0A087WZ39 114 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 ZNF732B4DXR9 585 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 NPIPB9F8W1W9 429 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 TTI1O43156 1089 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 ECE2O60344 883 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 ATP9AO75110 1047 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 KRT33AO76009 404 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 KRT5P13647 590 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 PRKACGP22612 351 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 AADACP22760 399 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 SRD5A2P31213 254 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 FRKP42685 505 aaPredicted RBP2.77□□□□□ -1.97
CD46-215ENST00000488596 NME5P56597 212 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 ASIC1P78348 528 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 AKAP17AQ02040 695 aaKnown RBP2.77□□□□□ -1.97
CD46-215ENST00000488596 TAB1Q15750 504 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 FAM189A2Q15884 450 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 ZNF674Q2M3X9 581 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 LRRC37A5PQ49AS3 106 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 GLRA4Q5JXX5 417 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 WLSQ5T9L3 541 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 CES4AQ5XG92 561 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 TMEM270Q6UE05 265 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 KCTD9Q7L273 389 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 CHMP1BQ7LBR1 199 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 TRMT11Q7Z4G4 463 aaKnown RBP2.77□□□□□ -1.97
CD46-215ENST00000488596 CATSPERDQ86XM0 798 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 ZNF614Q8N883 585 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 ZNF519Q8TB69 540 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 ZNRF4Q8WWF5 429 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 CKAP2Q8WWK9 683 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 SLCO2A1Q92959 643 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 PTP4A1Q93096 173 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 RFT1Q96AA3 541 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 OMA1Q96E52 524 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 C17orf62Q9BQA9 187 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 CACNG6Q9BXT2 260 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 ACPTQ9BZG2 426 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 NACAP1Q9BZK3 213 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 MRPL17Q9NRX2 175 aaKnown RBP2.77□□□□□ -1.97
CD46-215ENST00000488596 DNAJC17Q9NVM6 304 aaKnown RBP2.77□□□□□ -1.97
CD46-215ENST00000488596 SATB2Q9UPW6 733 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 TMED7Q9Y3B3 224 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 SELENOKQ9Y6D0 94 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 CSNK1G3Q9Y6M4 447 aa2.77□□□□□ -1.97
CD46-215ENST00000488596 LRCH4O75427 683 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 RAD51DO75771 328 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 GLCEO94923 617 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 C8orf89P0DMQ9 161 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 HLA-FP30511 346 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 CLK1P49759 484 aaKnown RBP2.76□□□□□ -1.97
CD46-215ENST00000488596 ADARP55265 1226 aaKnown RBP2.76□□□□□ -1.97
CD46-215ENST00000488596 IRX1P78414 480 aaPredicted RBP2.76□□□□□ -1.97
CD46-215ENST00000488596 GUCY2DQ02846 1103 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 SRSF9Q13242 221 aaKnown RBP eCLIP2.76□□□□□ -1.97
CD46-215ENST00000488596 NECTIN1Q15223 517 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 SMU1Q2TAY7 513 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 FAM106AQ4KMX7 169 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 ARMCX4Q5H9R4 360 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 C17orf107Q6ZR85 190 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 SNX32Q86XE0 403 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 CD99L2Q8TCZ2 262 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 ATP8B4Q8TF62 1192 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 AP2M1Q96CW1 435 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 SNRNP40Q96DI7 357 aaKnown RBP2.76□□□□□ -1.97
CD46-215ENST00000488596 CNRIP1Q96F85 164 aaPredicted RBP2.76□□□□□ -1.97
CD46-215ENST00000488596 CDKN2AIPNLQ96HQ2 116 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 POM121L2Q96KW2 1035 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 PANX3Q96QZ0 392 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 ZNF300Q96RE9 604 aaPredicted RBP2.76□□□□□ -1.97
CD46-215ENST00000488596 RASL10BQ96S79 203 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 IL12RB2Q99665 862 aa2.76□□□□□ -1.97
CD46-215ENST00000488596 ASCL2Q99929 193 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms