RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 H0YIV9 168 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 I3L1I5 382 aaPredicted RBP14.96□□□□□ -0.01
C9orf3-219ENST00000488186 FFAR3O14843 346 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 GPR42O15529 346 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 BPGMP07738 259 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 ZNF888P0CJ79 500 aaPredicted RBP14.96□□□□□ -0.01
C9orf3-219ENST00000488186 ZNF10P21506 573 aaPredicted RBP14.96□□□□□ -0.01
C9orf3-219ENST00000488186 FBLP22087 321 aaKnown RBP14.96□□□□□ -0.01
C9orf3-219ENST00000488186 HMOX2P30519 316 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 PKNOX1P55347 436 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 E2F2Q14209 437 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 SPACA3Q8IXA5 215 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 METTL6Q8TCB7 284 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 SNRNP27Q8WVK2 155 aaKnown RBP14.96□□□□□ -0.01
C9orf3-219ENST00000488186 CMTM7Q96FZ5 175 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 CNDP1Q96KN2 507 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 ATP6V1G3Q96LB4 118 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 C10orf90Q96M02 699 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 ZNF382Q96SR6 550 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 MECRQ9BV79 373 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 GPR87Q9BY21 358 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 FAM117AQ9C073 453 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 ELOVL6Q9H5J4 265 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 AKIRIN1Q9H9L7 192 aaPredicted RBP14.96□□□□□ -0.01
C9orf3-219ENST00000488186 MID1IP1Q9NPA3 183 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 FARSAQ9Y285 508 aaKnown RBP14.96□□□□□ -0.01
C9orf3-219ENST00000488186 PADI2Q9Y2J8 665 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 SLC22A7Q9Y694 548 aa14.96□□□□□ -0.01
C9orf3-219ENST00000488186 MDC1Q14676 2089 aaKnown RBP14.96□□□□□ -0.02
C9orf3-219ENST00000488186 H3BQF6 201 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 PPP6CO00743 305 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 OR4F21O95013 312 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 TGFB1P01137 390 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 LIFP15018 202 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 ALOX12P18054 663 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 PIK3CBP42338 1070 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 SERPINB4P48594 390 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 RAB8AP61006 207 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 OCA2Q04671 838 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 TLE3Q04726 772 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 TRAF3Q13114 568 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 DNASE1L3Q13609 305 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 SGO1Q5FBB7 561 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 TRIM40Q6P9F5 258 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 CCDC81Q6ZN84 652 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 FRMD7Q6ZUT3 714 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 CDYL2Q8N8U2 506 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 SRFBP1Q8NEF9 429 aaKnown RBP14.95□□□□□ -0.02
C9orf3-219ENST00000488186 OR9A4Q8NGU2 314 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 HUS1BQ8NHY5 278 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 MGARPQ8TDB4 240 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 CREB3L4Q8TEY5 395 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 ARL8AQ96BM9 186 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 TLCD1Q96CP7 247 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 MTERF1Q99551 399 aaKnown RBP14.95□□□□□ -0.02
C9orf3-219ENST00000488186 GATA5Q9BWX5 397 aaPredicted RBP14.95□□□□□ -0.02
C9orf3-219ENST00000488186 SLC6A16Q9GZN6 736 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 REXO4Q9GZR2 422 aaKnown RBP14.95□□□□□ -0.02
C9orf3-219ENST00000488186 GSTO2Q9H4Y5 243 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 COPS7BQ9H9Q2 264 aaPredicted RBP14.95□□□□□ -0.02
C9orf3-219ENST00000488186 EML4Q9HC35 981 aaKnown RBP14.95□□□□□ -0.02
C9orf3-219ENST00000488186 TRPS1Q9UHF7 1281 aa14.95□□□□□ -0.02
C9orf3-219ENST00000488186 TMEM120BA0PK00 339 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 LRIT2A6NDA9 550 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 H0YIG0 161 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 BIRC5O15392 142 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 ERI3O43414 337 aaKnown RBP14.94□□□□□ -0.02
C9orf3-219ENST00000488186 SH3BGRLO75368 114 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 MED26O95402 600 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 NSA2O95478 260 aaKnown RBP14.94□□□□□ -0.02
C9orf3-219ENST00000488186 KRT6AP02538 564 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 KRT6BP04259 564 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 ENO1P06733 434 aaKnown RBP14.94□□□□□ -0.02
C9orf3-219ENST00000488186 RAB40ALP0C0E4 278 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 IL1RNP18510 177 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 PTX3P26022 381 aaPredicted RBP14.94□□□□□ -0.02
C9orf3-219ENST00000488186 ETV4P43268 484 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 GCGRP47871 477 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 KRT6CP48668 564 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 RAP1GDS1P52306 607 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 PLA2G16P53816 162 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 BTN3A2P78410 334 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 GGTA1PQ4G0N0 100 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 DEFB134Q4QY38 66 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 TMEM35AQ53FP2 167 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 C10orf62Q5T681 223 aaPredicted RBP14.94□□□□□ -0.02
C9orf3-219ENST00000488186 FRG2Q64ET8 278 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 LCN10Q6JVE6 187 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 LETMD1Q6P1Q0 360 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 OVCH1Q7RTY7 1134 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 SYVN1Q86TM6 617 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 DTWD1Q8N5C7 304 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 ENDOVQ8N8Q3 282 aaKnown RBP14.94□□□□□ -0.02
C9orf3-219ENST00000488186 UTP15Q8TED0 518 aaKnown RBP14.94□□□□□ -0.02
C9orf3-219ENST00000488186 ZNF473Q8WTR7 871 aaKnown RBP14.94□□□□□ -0.02
C9orf3-219ENST00000488186 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.94□□□□□ -0.02
C9orf3-219ENST00000488186 SELENOMQ8WWX9 145 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 GAL3ST3Q96A11 431 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 FRG2BQ96QU4 278 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 F2RL3Q96RI0 385 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms