RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 NR4A3Q92570 626 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 TBC1D20Q96BZ9 403 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 NPAS2Q99743 824 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 EGFL8Q99944 293 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 AIF1LQ9BQI0 150 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 KCNK13Q9HB14 408 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 POPDC3Q9HBV1 291 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 MMP25Q9NPA2 562 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 CTNNAL1Q9UBT7 734 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 TEKT2Q9UIF3 430 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 POLEQ07864 2286 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 DOPEY1Q5JWR5 2465 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 CXorf49A8MYA2 514 aaPredicted RBP18.17■□□□□ 0.5
CD55-209ENST00000488171 SMIM10L1P0DMW3 83 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 COL8A1P27658 744 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 SSTR1P30872 391 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 HNMTP50135 292 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 ACER2Q5QJU3 275 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 NIPAL1Q6NVV3 410 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 ABHD13Q7L211 337 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 ADAMTSL2Q86TH1 951 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 KLHDC8AQ8IYD2 350 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 BEST3Q8N1M1 668 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 PYROXD1Q8WU10 500 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 ANP32BQ92688 251 aaKnown RBP18.17■□□□□ 0.5
CD55-209ENST00000488171 SMIM10Q96HG1 83 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 ZNF354BQ96LW1 612 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 ERP44Q9BS26 406 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 AICDAQ9GZX7 198 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 DPH5Q9H2P9 285 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 KLHL31Q9H511 634 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 GPAMQ9HCL2 828 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 WHRNQ9P202 907 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 MTO1Q9Y2Z2 717 aaKnown RBP18.17■□□□□ 0.5
CD55-209ENST00000488171 KCNE2Q9Y6J6 123 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 FAM187AA6NFU0 413 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 C4orf51C9J302 202 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 PRAMEF2O60811 474 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 STSP08842 583 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 HNF4AP41235 474 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 GDF5P43026 501 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 SLC6A12P48065 614 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 RAB8AP61006 207 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 SKP1P63208 163 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 ACTN3Q08043 901 aaPredicted RBP18.17■□□□□ 0.5
CD55-209ENST00000488171 USP10Q14694 798 aaKnown RBP18.17■□□□□ 0.5
CD55-209ENST00000488171 RBBP5Q15291 538 aaKnown RBP18.17■□□□□ 0.5
CD55-209ENST00000488171 FRA10AC1Q70Z53 315 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 CRLF3Q8IUI8 442 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 TRPV3Q8NET8 790 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 SPATA4Q8NEY3 305 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 CREB3L4Q8TEY5 395 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 RHBDF1Q96CC6 855 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 LPAR4Q99677 370 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 UNKQ9C0B0 810 aaKnown RBP18.17■□□□□ 0.5
CD55-209ENST00000488171 DERL2Q9GZP9 239 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 CAB39LQ9H9S4 337 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 SAYSD1Q9NPB0 183 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 GRHL1Q9NZI5 618 aa18.17■□□□□ 0.5
CD55-209ENST00000488171 CROCCQ5TZA2 2017 aa18.16■□□□□ 0.5
CD55-209ENST00000488171 RAD51CO43502 376 aa18.16■□□□□ 0.5
CD55-209ENST00000488171 MAN1A2O60476 641 aa18.16■□□□□ 0.5
CD55-209ENST00000488171 B4GALT2O60909 372 aa18.16■□□□□ 0.5
CD55-209ENST00000488171 WDR47O94967 919 aa18.16■□□□□ 0.5
CD55-209ENST00000488171 RASAL1O95294 804 aa18.16■□□□□ 0.5
CD55-209ENST00000488171 C1QAP02745 245 aa18.16■□□□□ 0.5
CD55-209ENST00000488171 JAK1P23458 1154 aa18.16■□□□□ 0.5
CD55-209ENST00000488171 MST1P26927 711 aa18.16■□□□□ 0.5
CD55-209ENST00000488171 KCNK10P57789 538 aa18.16■□□□□ 0.5
CD55-209ENST00000488171 OR4D2P58180 307 aa18.16■□□□□ 0.5
CD55-209ENST00000488171 SLC26A5P58743 744 aa18.16■□□□□ 0.5
CD55-209ENST00000488171 POU4F1Q01851 419 aa18.16■□□□□ 0.5
CD55-209ENST00000488171 SRSF11Q05519 484 aaKnown RBP18.16■□□□□ 0.5
CD55-209ENST00000488171 SLCO4C1Q6ZQN7 724 aa18.16■□□□□ 0.5
CD55-209ENST00000488171 SPATA6LQ8N4H0 392 aa18.16■□□□□ 0.5
CD55-209ENST00000488171 SUN3Q8TAQ9 357 aa18.16■□□□□ 0.5
CD55-209ENST00000488171 CLK4Q9HAZ1 481 aaKnown RBP18.16■□□□□ 0.5
CD55-209ENST00000488171 ABI3Q9P2A4 366 aa18.16■□□□□ 0.5
CD55-209ENST00000488171 TCRBV9S1A1TA0A576 114 aa18.15■□□□□ 0.5
CD55-209ENST00000488171 URADA6NGE7 173 aa18.15■□□□□ 0.5
CD55-209ENST00000488171 EIF3HO15372 352 aaKnown RBP eCLIP18.15■□□□□ 0.5
CD55-209ENST00000488171 SERPINA6P08185 405 aa18.15■□□□□ 0.5
CD55-209ENST00000488171 C1GALT1C1LP0DN25 315 aa18.15■□□□□ 0.5
CD55-209ENST00000488171 SLC12A2P55011 1212 aa18.15■□□□□ 0.5
CD55-209ENST00000488171 BTG2P78543 158 aa18.15■□□□□ 0.5
CD55-209ENST00000488171 C2orf54Q08AI8 447 aa18.15■□□□□ 0.5
CD55-209ENST00000488171 ILF2Q12905 390 aaKnown RBP18.15■□□□□ 0.5
CD55-209ENST00000488171 CALCOCO2Q13137 446 aa18.15■□□□□ 0.5
CD55-209ENST00000488171 TUBA3CQ13748 450 aa18.15■□□□□ 0.5
CD55-209ENST00000488171 TGFBIQ15582 683 aa18.15■□□□□ 0.5
CD55-209ENST00000488171 MEP1AQ16819 746 aa18.15■□□□□ 0.5
CD55-209ENST00000488171 TUBA3EQ6PEY2 450 aa18.15■□□□□ 0.5
CD55-209ENST00000488171 QSOX2Q6ZRP7 698 aa18.15■□□□□ 0.5
CD55-209ENST00000488171 MAATS1Q7Z4T9 603 aa18.15■□□□□ 0.5
CD55-209ENST00000488171 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.15■□□□□ 0.5
CD55-209ENST00000488171 MDS2Q8NDY4 140 aa18.15■□□□□ 0.5
CD55-209ENST00000488171 SIGLEC12Q96PQ1 595 aa18.15■□□□□ 0.5
CD55-209ENST00000488171 ZGRF1Q86YA3 2104 aa18.14■□□□□ 0.49
CD55-209ENST00000488171 NCF1BA6NI72 391 aaPredicted RBP18.14■□□□□ 0.49
CD55-209ENST00000488171 NCF1CA8MVU1 366 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms