RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 A8MV72 311 aaPredicted RBP10.86□□□□□ -0.67
TRIM56-204ENST00000487252 H0YGG7 62 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 I3L1I5 382 aaPredicted RBP10.86□□□□□ -0.67
TRIM56-204ENST00000487252 STX7O15400 261 aaKnown RBP10.86□□□□□ -0.67
TRIM56-204ENST00000487252 SUSD5O60279 629 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 PHF2O75151 1096 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 TP53P04637 393 aaPredicted RBP10.86□□□□□ -0.67
TRIM56-204ENST00000487252 SLC1A1P43005 524 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 GYS2P54840 703 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 ARF3P61204 181 aaPredicted RBP10.86□□□□□ -0.67
TRIM56-204ENST00000487252 MAT1AQ00266 395 aaKnown RBP10.86□□□□□ -0.67
TRIM56-204ENST00000487252 FAM53BQ14153 422 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 KRT81Q14533 505 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 SIX1Q15475 284 aaPredicted RBP10.86□□□□□ -0.67
TRIM56-204ENST00000487252 DUPD1Q68J44 220 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 LRRC8BQ6P9F7 803 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 C20orf204Q6ZNR8 217 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 C2orf73Q8N5S3 287 aaPredicted RBP10.86□□□□□ -0.67
TRIM56-204ENST00000487252 PRELID2Q8N945 189 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 BLOC1S5Q8TDH9 187 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 ISL2Q96A47 359 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 ULK4Q96C45 1275 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 LRRC45Q96CN5 670 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 PKNOX2Q96KN3 472 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 RUNDC3BQ96NL0 473 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 LPAR4Q99677 370 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 SGPP1Q9BX95 441 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 RAB11FIP5Q9BXF6 653 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 TXLNGYQ9BZA5 131 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 DRC3Q9H069 523 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 GLOD4Q9HC38 313 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 FKBPLQ9UIM3 349 aa10.86□□□□□ -0.67
TRIM56-204ENST00000487252 OR2W5A6NFC9 320 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 RNF223E7ERA6 249 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 SIAH2O43255 324 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 ERVK-10P10266 1014 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 EGR1P18146 543 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 CFPP27918 469 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 SOX18P35713 384 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 WNT3AP56704 352 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 RWDD2BP57060 319 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 SNRPNP63162 240 aaKnown RBP10.85□□□□□ -0.67
TRIM56-204ENST00000487252 PTK6Q13882 451 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 SLC1A5Q15758 541 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 HKDC1Q2TB90 917 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 SFT2D3Q587I9 215 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 TAX1BP1Q86VP1 789 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 CLDN19Q8N6F1 224 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 NIPA2Q8N8Q9 360 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 TNIP2Q8NFZ5 429 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 OR4K2Q8NGD2 314 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 KIAA1191Q96A73 305 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 IL17FQ96PD4 163 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 ZIM3Q96PE6 472 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 ZNF670Q9BS34 389 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 RAB17Q9H0T7 212 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 ZDHHC3Q9NYG2 299 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 UBP1Q9NZI7 540 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 CRLS1Q9UJA2 301 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 ACAD8Q9UKU7 415 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 ARL5AQ9Y689 179 aa10.85□□□□□ -0.67
TRIM56-204ENST00000487252 TRBV5-4A0A0C4DH59 114 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 SH3D21A4FU49 640 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 FAM166BA8MTA8 275 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 SPOPO43791 374 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 SHOX2O60902 331 aaPredicted RBP10.84□□□□□ -0.67
TRIM56-204ENST00000487252 PROSCO94903 275 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 ENDOUP21128 410 aaKnown RBP10.84□□□□□ -0.67
TRIM56-204ENST00000487252 TIMP3P35625 211 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 ZNF136P52737 540 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 MPP1Q00013 466 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 SRSF2Q01130 221 aaKnown RBP10.84□□□□□ -0.67
TRIM56-204ENST00000487252 DR1Q01658 176 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 MINDY4Q4G0A6 757 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 UBAP2Q5T6F2 1119 aaKnown RBP10.84□□□□□ -0.67
TRIM56-204ENST00000487252 WLSQ5T9L3 541 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 SEL1L2Q5TEA6 688 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 HIST2H2BDQ6DRA6 164 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 KIAA0408Q6ZU52 694 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 SNX20Q7Z614 316 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 SLC22A16Q86VW1 577 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 CPNE8Q86YQ8 564 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 CYP4Z2PQ8N1L4 340 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 SLC25A41Q8N5S1 370 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 CSNK1A1LQ8N752 337 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 GOLGA6L1Q8N7Z2 621 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 PLPP5Q8NEB5 264 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 OR2L3Q8NG85 312 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 OR2A1Q8NGT9 310 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 SARAFQ96BY9 339 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 MRGPRX2Q96LB1 330 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 SPATA13Q96N96 652 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 C19orf43Q9BQ61 176 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 ERP44Q9BS26 406 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 REG4Q9BYZ8 158 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 TTTY12Q9BZ98 90 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 FAM129AQ9BZQ8 928 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 ADAM19Q9H013 955 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 ZDHHC18Q9NUE0 388 aa10.84□□□□□ -0.67
TRIM56-204ENST00000487252 TMEM160Q9NX00 188 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms