RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 AVPR1BP47901 424 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 BTN3A2P78410 334 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 TARDBPQ13148 414 aaKnown RBP eCLIP12.74□□□□□ -0.379e-9■■■□□ 17.5
HMGN1-216ENST00000486741 HNRNPA1L2Q32P51 320 aaKnown RBP12.74□□□□□ -0.37
HMGN1-216ENST00000486741 PRSS58Q8IYP2 241 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 ZNF740Q8NDX6 193 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 ISG20Q96AZ6 181 aaKnown RBP12.74□□□□□ -0.37
HMGN1-216ENST00000486741 C12orf43Q96C57 262 aaKnown RBP12.74□□□□□ -0.37
HMGN1-216ENST00000486741 HSFX1Q9UBD0 423 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 ENOPH1Q9UHY7 261 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 ERGIC3Q9Y282 383 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 PARP14Q460N5 1801 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 PLOD2O00469 737 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 CCNB2O95067 398 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 C8BP07358 591 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 SLC35G6P0C7Q6 338 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 BMP2P12643 396 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 CD9P21926 228 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 UGT3A2Q3SY77 523 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 FAM78AQ5JUQ0 283 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 TMEM31Q5JXX7 168 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 ATG9BQ674R7 924 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 TRAF7Q6Q0C0 670 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 UGT2A3Q6UWM9 527 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 CCDC116Q8IYX3 515 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 ANKFN1Q8N957 763 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 DNAJB8Q8NHS0 232 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 SPATA5L1Q9BVQ7 753 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 CDC14AQ9UNH5 594 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 STON1Q9Y6Q2 735 aa12.74□□□□□ -0.37
HMGN1-216ENST00000486741 H3BNH8 94 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 H7C0S8 307 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 NDUFS2O75306 463 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 TYRP1P17643 537 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 JAK1P23458 1154 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 RGS8P57771 180 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-216ENST00000486741 GRSF1Q12849 480 aaKnown RBP eCLIP12.73□□□□□ -0.37
HMGN1-216ENST00000486741 CST6Q15828 149 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 ZNF438Q7Z4V0 828 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 EPHX4Q8IUS5 362 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 NAGSQ8N159 534 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 ZNF480Q8WV37 535 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 CIDECQ96AQ7 238 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-216ENST00000486741 ZNF689Q96CS4 500 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-216ENST00000486741 SPACA7Q96KW9 195 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 NTMT1Q9BV86 223 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 P2RY12Q9H244 342 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 TVP23BQ9NYZ1 205 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 NUAK1O60285 661 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 NME6O75414 186 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-216ENST00000486741 CCDC159P0C7I6 412 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 CPN2P22792 545 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 GSTM4Q03013 218 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 SNAPC1Q16533 368 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 KLHL12Q53G59 568 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 ZNF730Q6ZMV8 503 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 PRR23BQ6ZRT6 265 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 PDLIM5Q96HC4 596 aaKnown RBP12.73□□□□□ -0.37
HMGN1-216ENST00000486741 NKX2-4Q9H2Z4 354 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 J3QRK9 145 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 SLC16A5O15375 505 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 KLF8O95600 359 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-216ENST00000486741 CDH3P22223 829 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 CCT3P49368 545 aaKnown RBP12.73□□□□□ -0.37
HMGN1-216ENST00000486741 TMEM126BQ8IUX1 230 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 FBXL8Q96CD0 374 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 EID2BQ96D98 161 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 RIPOR3Q96MK2 946 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 PLGRKTQ9HBL7 147 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 HMG20AQ9NP66 347 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 PAK6Q9NQU5 681 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-216ENST00000486741 HEBP1Q9NRV9 189 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 GTF2A1LQ9UNN4 478 aa12.73□□□□□ -0.37
HMGN1-216ENST00000486741 K7ESM1 405 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 KRT8P05787 483 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 SRPRAP08240 638 aaKnown RBP12.72□□□□□ -0.37
HMGN1-216ENST00000486741 BMP1P13497 986 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 ZNF182P17025 639 aaPredicted RBP12.72□□□□□ -0.37
HMGN1-216ENST00000486741 PSMB5P28074 263 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 ZBED5Q49AG3 693 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 COQ5Q5HYK3 327 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 ASTLQ6HA08 431 aaPredicted RBP12.72□□□□□ -0.37
HMGN1-216ENST00000486741 PLEKHM3Q6ZWE6 761 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 CYP4Z2PQ8N1L4 340 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 POLR2IP36954 125 aaKnown RBP12.72□□□□□ -0.37
HMGN1-216ENST00000486741 SUOXP51687 545 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 C1orf61Q13536 156 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 SLC14A2Q15849 920 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 CLEC12AQ5QGZ9 265 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 NXPE4Q6UWF7 544 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 FAM46DQ8NEK8 389 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 NXPE3Q969Y0 559 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 PCBD2Q9H0N5 130 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 SPATA7Q9P0W8 599 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 URADA6NGE7 173 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 GNB5O14775 395 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 PABPC4LP0CB38 370 aaKnown RBP12.72□□□□□ -0.37
HMGN1-216ENST00000486741 POLR2CP19387 275 aaPredicted RBP12.72□□□□□ -0.37
HMGN1-216ENST00000486741 FPR1P21462 350 aa12.72□□□□□ -0.37
HMGN1-216ENST00000486741 CD72P21854 359 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms