RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 GMFGO60234 142 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 SPAG6O75602 509 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 SEC31AO94979 1220 aaKnown RBP6.55□□□□□ -1.36
HDAC3-209ENST00000486618 CALB1P05937 261 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 FGF4P08620 206 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 CLUP10909 449 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 FGF5P12034 268 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 F3P13726 295 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 UCHL3P15374 230 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 AMD1P17707 334 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 NSFP46459 744 aaKnown RBP6.55□□□□□ -1.36
HDAC3-209ENST00000486618 ZNF143P52747 638 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-209ENST00000486618 ADARP55265 1226 aaKnown RBP6.55□□□□□ -1.36
HDAC3-209ENST00000486618 SCAND1P57086 179 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 PDE1BQ01064 536 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 CDR2Q01850 454 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 PMS2P11Q13670 270 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 ZNF235Q14590 738 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 ZNF124Q15973 351 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 KCNMB1Q16558 191 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 INSCQ1MX18 579 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 ZRANB3Q5FWF4 1079 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 RALGPS1Q5JS13 557 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 TECPR1Q7Z6L1 1165 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 CPLX4Q7Z7G2 160 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 ADGRG6Q86SQ4 1221 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 SYVN1Q86TM6 617 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 RHOT1Q8IXI2 618 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 B4GALNT2Q8NHY0 566 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 CT55Q8WUE5 264 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 LZICQ8WZA0 190 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 MUL1Q969V5 352 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 PNPLA2Q96AD5 504 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 APIPQ96GX9 242 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 ZNF599Q96NL3 588 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 FCRL4Q96PJ5 515 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 KCNJ15Q99712 375 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 CNPY3Q9BT09 278 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 TBC1D10AQ9BXI6 508 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 PINK1Q9BXM7 581 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 ING2Q9H160 280 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 ACTL8Q9H568 366 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 ZNF768Q9H5H4 540 aaKnown RBP6.55□□□□□ -1.36
HDAC3-209ENST00000486618 OPA3Q9H6K4 179 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 PFDN4Q9NQP4 134 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 SLC35C2Q9NQQ7 365 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 SIRT3Q9NTG7 399 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-209ENST00000486618 WWOXQ9NZC7 414 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 ADAM22Q9P0K1 906 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 CPNE7Q9UBL6 633 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 REV1Q9UBZ9 1251 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 ERRFI1Q9UJM3 462 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-209ENST00000486618 SLC39A10Q9ULF5 831 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 FHOD1Q9Y613 1164 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 SVILO95425 2214 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 ZGRF1Q86YA3 2104 aa6.55□□□□□ -1.36
HDAC3-209ENST00000486618 TCRBV16S1A1N1A0A5B0 115 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 SYCE3A1L190 88 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 WDR91A4D1P6 747 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 NPIPB15A6NHN6 443 aaPredicted RBP6.54□□□□□ -1.36
HDAC3-209ENST00000486618 ARGFXA6NJG6 315 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 AGAP14A8MT82 685 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 HAT1O14929 419 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 ANGPT2O15123 496 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 RASSF9O75901 435 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 SCAF4O95104 1147 aaKnown RBP6.54□□□□□ -1.36
HDAC3-209ENST00000486618 EML2O95834 649 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 VIPP01282 170 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 OPN1LWP04000 364 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 ACP5P13686 325 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 ZNF30P17039 623 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 XRCC1P18887 633 aaPredicted RBP6.54□□□□□ -1.36
HDAC3-209ENST00000486618 LHCGRP22888 699 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 PTPN4P29074 926 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 CBX5P45973 191 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 STARP49675 285 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 AGFG1P52594 562 aaKnown RBP6.54□□□□□ -1.36
HDAC3-209ENST00000486618 ZNF135P52742 658 aaPredicted RBP6.54□□□□□ -1.36
HDAC3-209ENST00000486618 GFERP55789 205 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 TRA2BP62995 288 aaKnown RBP6.54□□□□□ -1.36
HDAC3-209ENST00000486618 SLC10A7Q0GE19 358 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 RCN2Q14257 317 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 CASP8Q14790 479 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 ARHGAP19Q14CB8 494 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 IGSF11Q5DX21 431 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 TMEM201Q5SNT2 666 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 ARMC12Q5T9G4 340 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 CACHD1Q5VU97 1274 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 CAVIN1Q6NZI2 390 aaKnown RBP6.54□□□□□ -1.36
HDAC3-209ENST00000486618 DCUN1D2Q6PH85 259 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 TMEM26Q6ZUK4 368 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 PRSS42Q7Z5A4 293 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 PHYKPLQ8IUZ5 450 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 LIX1LQ8IVB5 337 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 TRIM48Q8IWZ4 208 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 SYCE1Q8N0S2 351 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 IQCKQ8N0W5 287 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 C17orf53Q8N3J3 647 aaPredicted RBP6.54□□□□□ -1.36
HDAC3-209ENST00000486618 AOPEPQ8N6M6 819 aa6.54□□□□□ -1.36
HDAC3-209ENST00000486618 ENKURQ8TC29 256 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms