RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 SMIM10L2AP0DMW4 78 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 SMIM10L2BP0DMW5 78 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 SLC6A6P31641 620 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 RXRGP48443 463 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 PDX1P52945 283 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 B3GALT5-AS1P59052 145 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 RPS6P62753 249 aaKnown RBP3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 CDK3Q00526 305 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 DMPKQ09013 629 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 MGAT3Q09327 533 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 HNRNPDQ14103 355 aaKnown RBP3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 CTU2Q2VPK5 515 aaKnown RBP3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 HSDL1Q3SXM5 330 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 PLEKHS1Q5SXH7 462 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 ZNF613Q6PF04 617 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 METTL7BQ6UX53 244 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 TMEM184AQ6ZMB5 413 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 TDRD5Q8NAT2 981 aaKnown RBP3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 GMCL1P1Q8NEA9 526 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 DYRK2Q92630 601 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 ATP6V0A1Q93050 837 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 P2RX5Q93086 422 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 MAGED4Q96JG8 741 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 TIGD1Q96MW7 591 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 NAP1L4Q99733 375 aaKnown RBP3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 RBM4BQ9BQ04 359 aaKnown RBP3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 CHCHD6Q9BRQ6 235 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 BTBD10Q9BSF8 475 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 SYT11Q9BT88 431 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 LMF2Q9BU23 707 aaKnown RBP3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 CPVLQ9H3G5 476 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 SDR39U1Q9NRG7 319 aaPredicted RBP3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 ARHGEF38Q9NXL2 777 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 WSB2Q9NYS7 404 aaPredicted RBP3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 DUSP12Q9UNI6 340 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 MTF2Q9Y483 593 aaPredicted RBP3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 SPTA1P02549 2419 aa3.99□□□□□ -1.77
SMARCC1-207ENST00000485833 RAD50Q92878 1312 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 TEX15Q9BXT5 2789 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 PIEZO2Q9H5I5 2752 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 OR2A25A4D2G3 310 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 AGAP14A8MT82 685 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 XRCC3O43542 346 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 PRAMEF11O60813 436 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 KINO60870 393 aaKnown RBP3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 RNASEH1O60930 286 aaKnown RBP3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 SORBS2O94875 1100 aaKnown RBP3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 GH1P01241 217 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 GPIP06744 558 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 EPCAMP16422 314 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 CA6P23280 308 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 NKX2-1P43699 371 aaPredicted RBP3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 STAT2P52630 851 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 DHRS7BQ6IAN0 325 aaPredicted RBP3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 FIGLAQ6QHK4 219 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 LSMEM2Q8N112 164 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 MAPKAPK5-AS1Q8N8E1 139 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 OR13J1Q8NGT2 312 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 OR4C3Q8NH37 302 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 ZFAND2BQ8WV99 257 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 FAM120BQ96EK7 910 aaKnown RBP3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 TAAR1Q96RJ0 339 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 EGFL8Q99944 293 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 VGLL1Q99990 258 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 SYT15Q9BQS2 421 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 FNDC11Q9BVV2 318 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 ZNF701Q9NV72 531 aaPredicted RBP3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 ASIC3Q9UHC3 531 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 SMAD5-AS1Q9Y6J3 95 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 COL12A1Q99715 3063 aa3.98□□□□□ -1.77
SMARCC1-207ENST00000485833 MYH6P13533 1939 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 GREB1Q4ZG55 1949 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 ANKRD17O75179 2603 aaKnown RBP3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 F5P12259 2224 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 IGLV7-46A0A075B6I9 117 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 KRTAP9-6A8MVA2 160 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 CTDSP2O14595 271 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 DOK2O60496 412 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 MED24O75448 989 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 KHDRBS3O75525 346 aaKnown RBP3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 PRB1P04280 392 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 CASTP20810 708 aaKnown RBP3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 PAX3P23760 479 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 CD52P31358 61 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 LMO4P61968 165 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 MC1RQ01726 317 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 SRSF5Q13243 272 aaKnown RBP3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 TMEM266Q2M3C6 531 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 KRT79Q5XKE5 535 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 TRIM65Q6PJ69 517 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 SZRD1Q7Z422 152 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 TMEM173Q86WV6 379 aaPredicted RBP3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 COMMD2Q86X83 199 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 RPAP2Q8IXW5 612 aaPredicted RBP3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 LYG1Q8N1E2 194 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 SPEM1Q8N4L4 309 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 MARVELD2Q8N4S9 558 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 RAB42Q8N4Z0 105 aa3.97□□□□□ -1.77
SMARCC1-207ENST00000485833 COLGALT1Q8NBJ5 622 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms