RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 TSNARE1Q96NA8 513 aa16.12■□□□□ 0.17
SMC4-216ENST00000485645 RUNDC3BQ96NL0 473 aa16.12■□□□□ 0.17
SMC4-216ENST00000485645 SIGLEC12Q96PQ1 595 aa16.12■□□□□ 0.17
SMC4-216ENST00000485645 KLHL1Q9NR64 748 aa16.12■□□□□ 0.17
SMC4-216ENST00000485645 ANKRD10Q9NXR5 420 aa16.12■□□□□ 0.17
SMC4-216ENST00000485645 ZFATQ9P243 1243 aa16.12■□□□□ 0.17
SMC4-216ENST00000485645 IKZF3Q9UKT9 509 aa16.12■□□□□ 0.17
SMC4-216ENST00000485645 DYRK1BQ9Y463 629 aa16.12■□□□□ 0.17
SMC4-216ENST00000485645 ARHGAP10A1A4S6 786 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 URADA6NGE7 173 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 USP27XA6NNY8 438 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 CCL21O00585 134 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 B4GALT2O60909 372 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 DNAJB6O75190 326 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 B3GALT4O96024 378 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 CD46P15529 392 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 SAT1P21673 171 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 CA7P43166 264 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 ST13P50502 369 aaKnown RBP16.11■□□□□ 0.17
SMC4-216ENST00000485645 ARL4CP56559 192 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 SLC26A5P58743 744 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 DR1Q01658 176 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 FRG1Q14331 258 aaKnown RBP16.11■□□□□ 0.17
SMC4-216ENST00000485645 OR1C1Q15619 314 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 SPINK14Q6IE38 97 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 MTFR2Q6P444 385 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 THOC6Q86W42 341 aaKnown RBP16.11■□□□□ 0.17
SMC4-216ENST00000485645 NKAPQ8N5F7 415 aaKnown RBP16.11■□□□□ 0.17
SMC4-216ENST00000485645 HORMAD2Q8N7B1 307 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 TRPV3Q8NET8 790 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 UTP15Q8TED0 518 aaKnown RBP16.11■□□□□ 0.17
SMC4-216ENST00000485645 MARVELD3Q96A59 401 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 CAPZA3Q96KX2 299 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 PTCHD1Q96NR3 888 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 NPAS2Q99743 824 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 AIF1LQ9BQI0 150 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 WDR83Q9BRX9 315 aaKnown RBP16.11■□□□□ 0.17
SMC4-216ENST00000485645 SPNS1Q9H2V7 528 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 PELI2Q9HAT8 420 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 CLK4Q9HAZ1 481 aaKnown RBP16.11■□□□□ 0.17
SMC4-216ENST00000485645 SLC22A14Q9Y267 594 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 KCNE2Q9Y6J6 123 aa16.11■□□□□ 0.17
SMC4-216ENST00000485645 ENO4A6NNW6 628 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 GABRR3A8MPY1 467 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 NDC80O14777 642 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 MAN1A2O60476 641 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 PRMT3O60678 531 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 MLYCDO95822 493 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 ZNF37AP17032 561 aaPredicted RBP16.1■□□□□ 0.17
SMC4-216ENST00000485645 EEF1DP29692 281 aaKnown RBP16.1■□□□□ 0.17
SMC4-216ENST00000485645 HNF4AP41235 474 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 ITGA8P53708 1063 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 CASP6P55212 293 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 REEP5Q00765 189 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 OC90Q02509 493 aaPredicted RBP16.1■□□□□ 0.17
SMC4-216ENST00000485645 MGAT5Q09328 741 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 ART3Q13508 389 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 RBBP5Q15291 538 aaKnown RBP16.1■□□□□ 0.17
SMC4-216ENST00000485645 PPP1R3AQ16821 1122 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 NXPE4Q6UWF7 544 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 QSOX2Q6ZRP7 698 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 TMPRSS11BQ86T26 416 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 ANKMY2Q8IV38 441 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 LGI4Q8N135 537 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 ANKRD53Q8N9V6 530 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 TMEM178AQ8NBL3 297 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 ELP5Q8TE02 316 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 ITLN2Q8WWU7 325 aaPredicted RBP16.1■□□□□ 0.17
SMC4-216ENST00000485645 ANKRD7Q92527 254 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 SCMH1Q96GD3 660 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 CCDC120Q96HB5 630 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 EGFL8Q99944 293 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 HES7Q9BYE0 225 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 CDCP1Q9H5V8 836 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 SH3BGRL2Q9UJC5 107 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 PYCARDQ9ULZ3 195 aa16.1■□□□□ 0.17
SMC4-216ENST00000485645 FAM95CA0A1B0GW59 222 aa16.09■□□□□ 0.17
SMC4-216ENST00000485645 FAM227AF5H4B4 570 aa16.09■□□□□ 0.17
SMC4-216ENST00000485645 PSMD12O00232 456 aaPredicted RBP16.09■□□□□ 0.17
SMC4-216ENST00000485645 CDC7O00311 574 aa16.09■□□□□ 0.17
SMC4-216ENST00000485645 CDK2AP1O14519 115 aa16.09■□□□□ 0.17
SMC4-216ENST00000485645 SLC19A2O60779 497 aa16.09■□□□□ 0.17
SMC4-216ENST00000485645 WISP2O76076 250 aa16.09■□□□□ 0.17
SMC4-216ENST00000485645 RAB8AP61006 207 aa16.09■□□□□ 0.17
SMC4-216ENST00000485645 ALDH6A1Q02252 535 aaKnown RBP16.09■□□□□ 0.17
SMC4-216ENST00000485645 KRTCAP3Q53RY4 240 aa16.09■□□□□ 0.17
SMC4-216ENST00000485645 MRGPRGQ86SM5 289 aa16.09■□□□□ 0.17
SMC4-216ENST00000485645 ZC3HC1Q86WB0 502 aaKnown RBP16.09■□□□□ 0.17
SMC4-216ENST00000485645 RPS19BP1Q86WX3 136 aaKnown RBP16.09■□□□□ 0.17
SMC4-216ENST00000485645 CYP4X1Q8N118 509 aa16.09■□□□□ 0.17
SMC4-216ENST00000485645 FAM98AQ8NCA5 519 aaKnown RBP16.09■□□□□ 0.17
SMC4-216ENST00000485645 TRIM51Q9BSJ1 452 aa16.09■□□□□ 0.17
SMC4-216ENST00000485645 SLC6A16Q9GZN6 736 aa16.09■□□□□ 0.17
SMC4-216ENST00000485645 LRFN1Q9P244 771 aa16.09■□□□□ 0.17
SMC4-216ENST00000485645 KLF2Q9Y5W3 355 aaPredicted RBP16.09■□□□□ 0.17
SMC4-216ENST00000485645 PSAT1Q9Y617 370 aa16.09■□□□□ 0.17
SMC4-216ENST00000485645 CTAGE15A4D2H0 777 aa16.08■□□□□ 0.16
SMC4-216ENST00000485645 ASPDHA6ND91 283 aa16.08■□□□□ 0.16
SMC4-216ENST00000485645 NPEPPSL1A6NEC2 478 aa16.08■□□□□ 0.16
SMC4-216ENST00000485645 SEC31AO94979 1220 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms