RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 VWA5B1Q5TIE3 1220 aa16.73■□□□□ 0.27
CHMP3-207ENST00000485465 TMEM214Q6NUQ4 689 aaKnown RBP16.73■□□□□ 0.27
CHMP3-207ENST00000485465 PPP1R3BQ86XI6 285 aa16.73■□□□□ 0.27
CHMP3-207ENST00000485465 ARHGEF39Q8N4T4 335 aa16.73■□□□□ 0.27
CHMP3-207ENST00000485465 WDR36Q8NI36 951 aaKnown RBP16.73■□□□□ 0.27
CHMP3-207ENST00000485465 THOC1Q96FV9 657 aaKnown RBP16.73■□□□□ 0.27
CHMP3-207ENST00000485465 TRIM55Q9BYV6 548 aa16.73■□□□□ 0.27
CHMP3-207ENST00000485465 NPHS2Q9NP85 383 aa16.73■□□□□ 0.27
CHMP3-207ENST00000485465 RIC8BQ9NVN3 520 aa16.73■□□□□ 0.27
CHMP3-207ENST00000485465 ATP6AP2A0A1C7CYW4 349 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 SRRM3A6NNA2 597 aaPredicted RBP16.72■□□□□ 0.27
CHMP3-207ENST00000485465 NPIPB8E9PQR5 432 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 SDHDO14521 159 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 ATP6AP2O75787 350 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 RSL1D1O76021 490 aaKnown RBP16.72■□□□□ 0.27
CHMP3-207ENST00000485465 SEMA3DO95025 777 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 JMJD7P0C870 316 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 SMIM10L1P0DMW3 83 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 ITIH1P19827 911 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 ETV5P41161 510 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 GCGRP47871 477 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 AQP5P55064 265 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 TBL3Q12788 808 aaKnown RBP16.72■□□□□ 0.27
CHMP3-207ENST00000485465 NDUFA9Q16795 377 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 SPDYAQ5MJ70 313 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 GARNL3Q5VVW2 1013 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 EPGNQ6UW88 154 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 UBE3DQ7Z6J8 389 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 MARCH9Q86YJ5 346 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 SRFBP1Q8NEF9 429 aaKnown RBP16.72■□□□□ 0.27
CHMP3-207ENST00000485465 OR2L5Q8NG80 312 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 RFWD2Q8NHY2 731 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 ZCCHC10Q8TBK6 192 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 UTP15Q8TED0 518 aaKnown RBP16.72■□□□□ 0.27
CHMP3-207ENST00000485465 GAL3ST3Q96A11 431 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 RGMAQ96B86 450 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 SMIM10Q96HG1 83 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 C10orf90Q96M02 699 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 CTRCQ99895 268 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 SIKE1Q9BRV8 207 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 CENPKQ9BS16 269 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 EPN3Q9H201 632 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 PISDQ9UG56 409 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 MRPS2Q9Y399 296 aaKnown RBP16.72■□□□□ 0.27
CHMP3-207ENST00000485465 SLC22A7Q9Y694 548 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 CEP250Q9BV73 2442 aa16.72■□□□□ 0.27
CHMP3-207ENST00000485465 PMS2P1A4D2B8 440 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 C4orf51C9J302 202 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 LSM1O15116 133 aaKnown RBP16.71■□□□□ 0.27
CHMP3-207ENST00000485465 ZNF749O43361 778 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 ERI3O43414 337 aaKnown RBP16.71■□□□□ 0.27
CHMP3-207ENST00000485465 VPS4BO75351 444 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 MED26O95402 600 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 ZNF888P0CJ79 500 aaPredicted RBP16.71■□□□□ 0.27
CHMP3-207ENST00000485465 PRPH2P23942 346 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 IDH3AP50213 366 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 RAP1GDS1P52306 607 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 MAPK10P53779 464 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 PLA2G16P53816 162 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 RAB15P59190 212 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 RAB8AP61006 207 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 SNRPNP63162 240 aaKnown RBP16.71■□□□□ 0.27
CHMP3-207ENST00000485465 TGM3Q08188 693 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 NR6A1Q15406 480 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 FAM214AQ32MH5 1076 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.71■□□□□ 0.27
CHMP3-207ENST00000485465 SLC9B1Q4ZJI4 515 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 C3orf38Q5JPI3 329 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 PRAMEF17Q5VTA0 474 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 YOD1Q5VVQ6 348 aaPredicted RBP16.71■□□□□ 0.27
CHMP3-207ENST00000485465 PWWP2BQ6NUJ5 590 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 TRIM40Q6P9F5 258 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 ABHD17CQ6PCB6 329 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 ABHD13Q7L211 337 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 CPLX4Q7Z7G2 160 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 CHTF18Q8WVB6 975 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 TUBGCP3Q96CW5 907 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 APIPQ96GX9 242 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 MAELQ96JY0 434 aaKnown RBP16.71■□□□□ 0.27
CHMP3-207ENST00000485465 TAAR9Q96RI9 348 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 NDC1Q9BTX1 674 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 MRPL1Q9BYD6 325 aaKnown RBP16.71■□□□□ 0.27
CHMP3-207ENST00000485465 NSRP1Q9H0G5 558 aaKnown RBP16.71■□□□□ 0.27
CHMP3-207ENST00000485465 WDR55Q9H6Y2 383 aaPredicted RBP16.71■□□□□ 0.27
CHMP3-207ENST00000485465 AKTIPQ9H8T0 292 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 LRTM1Q9HBL6 345 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 CUTCQ9NTM9 273 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 AHSPQ9NZD4 102 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 DCTN4Q9UJW0 460 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 SATB2Q9UPW6 733 aa16.71■□□□□ 0.27
CHMP3-207ENST00000485465 MDC1Q14676 2089 aaKnown RBP16.71■□□□□ 0.27
CHMP3-207ENST00000485465 PLPP1O14494 284 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 DIAPH2O60879 1101 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 PEX11AO75192 247 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 SCRG1O75711 98 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 TIAF1O95411 115 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 ALOX12P18054 663 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 EPHA3P29320 983 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 ARFIP1P53367 373 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 ARSFP54793 590 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms