RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 NDC80O14777 642 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 ZNHIT1O43257 154 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 NEURL1O76050 574 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 ZNF888P0CJ79 500 aaPredicted RBP18.06■□□□□ 0.48
COL27A1-205ENST00000485397 ESRRAP11474 423 aaPredicted RBP18.06■□□□□ 0.48
COL27A1-205ENST00000485397 TAS2R50P59544 299 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 PWP1Q13610 501 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 BBS9Q3SYG4 887 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 HP1BP3Q5SSJ5 553 aaPredicted RBP18.06■□□□□ 0.48
COL27A1-205ENST00000485397 TEDDM1Q5T9Z0 273 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 SLC25A25Q6KCM7 469 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 KIAA0408Q6ZU52 694 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.06■□□□□ 0.48
COL27A1-205ENST00000485397 CTAGE6Q86UF2 777 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 RPS19BP1Q86WX3 136 aaKnown RBP18.06■□□□□ 0.48
COL27A1-205ENST00000485397 SLC35F6Q8N357 371 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 TMEM178AQ8NBL3 297 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 GABPB2Q8TAK5 448 aaPredicted RBP18.06■□□□□ 0.48
COL27A1-205ENST00000485397 NT5CQ8TCD5 201 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 ELP5Q8TE02 316 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 SLC5A11Q8WWX8 675 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 FBXL8Q96CD0 374 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 FRMD6Q96NE9 622 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 OLFM1Q99784 485 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 TRIM54Q9BYV2 358 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 ZNF835Q9Y2P0 537 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 PCNX1Q96RV3 2341 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 CSMD1Q96PZ7 3565 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 LRBAP50851 2863 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 GOLGA6L10A0A0M3HER8 536 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 PABPN1LA6NDY0 278 aaKnown RBP18.05■□□□□ 0.48
COL27A1-205ENST00000485397 SP1P08047 785 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 HNF4AP41235 474 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 SCTRP47872 440 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 AP1S2P56377 157 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 BTG2P78543 158 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 RGS1Q08116 209 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 KRTCAP3Q53RY4 240 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 SPPL2CQ8IUH8 684 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 CYP4X1Q8N118 509 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 ADAMTS18Q8TE60 1221 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 UTP15Q8TED0 518 aaKnown RBP18.05■□□□□ 0.48
COL27A1-205ENST00000485397 NEIL2Q969S2 332 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 MAGED4Q96JG8 741 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 PWWP2AQ96N64 755 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 TSNARE1Q96NA8 513 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 PTCHD1Q96NR3 888 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 DDX47Q9H0S4 455 aaKnown RBP18.05■□□□□ 0.48
COL27A1-205ENST00000485397 CHST11Q9NPF2 352 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 PPANQ9NQ55 473 aaKnown RBP18.05■□□□□ 0.48
COL27A1-205ENST00000485397 LRFN1Q9P244 771 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 ZFP69BQ9UJL9 534 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 VWA7Q9Y334 891 aa18.05■□□□□ 0.48
COL27A1-205ENST00000485397 JAK1P23458 1154 aa18.04■□□□□ 0.48
COL27A1-205ENST00000485397 ELAVL4P26378 380 aaKnown RBP18.04■□□□□ 0.48
COL27A1-205ENST00000485397 RAB8AP61006 207 aa18.04■□□□□ 0.48
COL27A1-205ENST00000485397 CSHL1Q14406 222 aa18.04■□□□□ 0.48
COL27A1-205ENST00000485397 CDSNQ15517 529 aa18.04■□□□□ 0.48
COL27A1-205ENST00000485397 MAPKAPK3Q16644 382 aa18.04■□□□□ 0.48
COL27A1-205ENST00000485397 TRMT10BQ6PF06 316 aaKnown RBP18.04■□□□□ 0.48
COL27A1-205ENST00000485397 XKRXQ6PP77 449 aa18.04■□□□□ 0.48
COL27A1-205ENST00000485397 NCCRP1Q6ZVX7 275 aaPredicted RBP18.04■□□□□ 0.48
COL27A1-205ENST00000485397 STRA8Q7Z7C7 330 aa18.04■□□□□ 0.48
COL27A1-205ENST00000485397 GALNT7Q86SF2 657 aa18.04■□□□□ 0.48
COL27A1-205ENST00000485397 SIAH3Q8IW03 269 aa18.04■□□□□ 0.48
COL27A1-205ENST00000485397 LGI4Q8N135 537 aa18.04■□□□□ 0.48
COL27A1-205ENST00000485397 TBC1D19Q8N5T2 526 aa18.04■□□□□ 0.48
COL27A1-205ENST00000485397 ATL1Q8WXF7 558 aa18.04■□□□□ 0.48
COL27A1-205ENST00000485397 CFAP36Q96G28 342 aa18.04■□□□□ 0.48
COL27A1-205ENST00000485397 NAT9Q9BTE0 207 aa18.04■□□□□ 0.48
COL27A1-205ENST00000485397 ASNA1O43681 348 aa18.03■□□□□ 0.48
COL27A1-205ENST00000485397 PRMT3O60678 531 aa18.03■□□□□ 0.48
COL27A1-205ENST00000485397 MLYCDO95822 493 aa18.03■□□□□ 0.48
COL27A1-205ENST00000485397 COX6B1P14854 86 aa18.03■□□□□ 0.48
COL27A1-205ENST00000485397 TPP2P29144 1249 aaPredicted RBP18.03■□□□□ 0.48
COL27A1-205ENST00000485397 AHRP35869 848 aa18.03■□□□□ 0.48
COL27A1-205ENST00000485397 ELK3P41970 407 aa18.03■□□□□ 0.48
COL27A1-205ENST00000485397 HSF1Q00613 529 aa18.03■□□□□ 0.48
COL27A1-205ENST00000485397 REEP5Q00765 189 aa18.03■□□□□ 0.48
COL27A1-205ENST00000485397 RNFT1Q5M7Z0 435 aa18.03■□□□□ 0.48
COL27A1-205ENST00000485397 SBSNQ6UWP8 590 aa18.03■□□□□ 0.48
COL27A1-205ENST00000485397 Q6ZPB1 254 aaPredicted RBP18.03■□□□□ 0.48
COL27A1-205ENST00000485397 ABHD13Q7L211 337 aa18.03■□□□□ 0.48
COL27A1-205ENST00000485397 HORMAD2Q8N7B1 307 aa18.03■□□□□ 0.48
COL27A1-205ENST00000485397 ANKRD53Q8N9V6 530 aa18.03■□□□□ 0.48
COL27A1-205ENST00000485397 WDR83Q9BRX9 315 aaKnown RBP18.03■□□□□ 0.48
COL27A1-205ENST00000485397 RHBGQ9H310 441 aa18.03■□□□□ 0.48
COL27A1-205ENST00000485397 KLHL31Q9H511 634 aa18.03■□□□□ 0.48
COL27A1-205ENST00000485397 CHMP2BQ9UQN3 213 aa18.03■□□□□ 0.48
COL27A1-205ENST00000485397 PKDREJQ9NTG1 2253 aa18.03■□□□□ 0.48
COL27A1-205ENST00000485397 A8MUA0 341 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 C19orf84I3L1E1 186 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 SLC25A12O75746 678 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 ENO2P09104 434 aaPredicted RBP18.02■□□□□ 0.48
COL27A1-205ENST00000485397 SMIM10L1P0DMW3 83 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 MAOAP21397 527 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 IVDP26440 423 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 PTGER4P35408 488 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 SMSP52788 366 aa18.02■□□□□ 0.48
COL27A1-205ENST00000485397 MLF1P58340 268 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms