RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 NAALAD2Q9Y3Q0 740 aa12.22□□□□□ -0.45
HDAC6-227ENST00000485102 ZNF407Q9C0G0 2248 aa12.22□□□□□ -0.45
HDAC6-227ENST00000485102 SDR42E2A6NKP2 422 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 FANCGO15287 622 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 GALR3O60755 368 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-227ENST00000485102 AVILO75366 819 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 FHP07954 510 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 SLC35G6P0C7Q6 338 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 NPPBP16860 134 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 ZNF24P17028 368 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 COILP38432 576 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-227ENST00000485102 CYB561P49447 251 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 HLCSP50747 726 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 OR4D2P58180 307 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 MLF1P58340 268 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 SKP1P63208 163 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 TLE4Q04727 773 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 CTBP1Q13363 440 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 THOC5Q13769 683 aaKnown RBP12.21□□□□□ -0.45
HDAC6-227ENST00000485102 ZNF468Q5VIY5 522 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-227ENST00000485102 LCTLQ6UWM7 567 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 SYT10Q6XYQ8 523 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 FGD2Q7Z6J4 655 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 CDH24Q86UP0 819 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 DENND6AQ8IWF6 608 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 MFSD9Q8NBP5 474 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 MCUQ8NE86 351 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 MNS1Q8NEH6 495 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 C16orf52Q8NHV5 167 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 CALML6Q8TD86 181 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 CA5BP1Q8WTZ4 195 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 PEX11GQ96HA9 241 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 C16orf45Q96MC5 204 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-227ENST00000485102 GPR21Q99679 349 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 PARVBQ9HBI1 364 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 ABCF3Q9NUQ8 709 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 COQ3Q9NZJ6 369 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 SAMD15Q9P1V8 674 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 PDE10AQ9Y233 779 aa12.21□□□□□ -0.45
HDAC6-227ENST00000485102 HCFC1P51610 2035 aa12.21□□□□□ -0.46
HDAC6-227ENST00000485102 ABCA4P78363 2273 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 FEZF1A0PJY2 475 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 SLC16A5O15375 505 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 STATHP02808 62 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 C8GP07360 202 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 ALOX12P18054 663 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 JAK1P23458 1154 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 KCNJ1P48048 391 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 FNTAP49354 379 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 SP140Q13342 867 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 MAPKAPK3Q16644 382 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 UGT3A1Q6NUS8 523 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 AGTRAPQ6RW13 159 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 QSOX2Q6ZRP7 698 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 SYDE1Q6ZW31 735 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-227ENST00000485102 PIWIL4Q7Z3Z4 852 aaKnown RBP12.2□□□□□ -0.46
HDAC6-227ENST00000485102 CPNE9Q8IYJ1 553 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 NFAM1Q8NET5 270 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-227ENST00000485102 TSLPQ969D9 159 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 SDCCAG3Q96C92 435 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 HAUS8Q9BT25 410 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 AARSD1Q9BTE6 412 aaKnown RBP12.2□□□□□ -0.46
HDAC6-227ENST00000485102 XAB2Q9HCS7 855 aaKnown RBP12.2□□□□□ -0.46
HDAC6-227ENST00000485102 FBXO6Q9NRD1 293 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-227ENST00000485102 PLSCR2Q9NRY7 297 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 FBXO5Q9UKT4 447 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 PPT2Q9UMR5 302 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 SH2B3Q9UQQ2 575 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 NF1P21359 2839 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 AKAP6Q13023 2319 aa12.2□□□□□ -0.46
HDAC6-227ENST00000485102 FOXO6A8MYZ6 492 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 CHST10O43529 356 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 TPP2P29144 1249 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-227ENST00000485102 CXCR5P32302 372 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 PTGS2P35354 604 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 SLC1A2P43004 574 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 MAGEA3P43357 314 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 RGS4P49798 205 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 TIAL1Q01085 375 aaKnown RBP eCLIP12.19□□□□□ -0.463e-9■□□□□ 10.5
HDAC6-227ENST00000485102 NAE1Q13564 534 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 WHAMMP3Q1A5X7 153 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 TMEM211Q6ICI0 200 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 CASC4Q6P4E1 433 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 MEX3BQ6ZN04 569 aaKnown RBP12.19□□□□□ -0.46
HDAC6-227ENST00000485102 KIAA0408Q6ZU52 694 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 NCCRP1Q6ZVX7 275 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-227ENST00000485102 CPSF7Q8N684 471 aaKnown RBP12.19□□□□□ -0.46
HDAC6-227ENST00000485102 ZNF740Q8NDX6 193 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 OR5T3Q8NGG3 340 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 LILRB4Q8NHJ6 448 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 ZCCHC10Q8TBK6 192 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 FAM57AQ8TBR7 257 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 ASB5Q8WWX0 329 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 TMEM125Q96AQ2 219 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 ZNF669Q96BR6 464 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-227ENST00000485102 TNFRSF10DQ9UBN6 386 aa12.19□□□□□ -0.46
HDAC6-227ENST00000485102 KLF13Q9Y2Y9 288 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-227ENST00000485102 PHF3Q92576 2039 aaKnown RBP12.19□□□□□ -0.46
HDAC6-227ENST00000485102 IGKV3D-11A0A0A0MRZ8 115 aa12.18□□□□□ -0.46
HDAC6-227ENST00000485102 TCRBV16S1A1N1A0A5B0 115 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms