RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 PGGT1BP53609 377 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 KCNK10P57789 538 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 VSX2P58304 361 aaPredicted RBP9.48□□□□□ -0.89
CPSF4-213ENST00000484112 SKP1P63208 163 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 PCDH1Q08174 1060 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 PWP1Q13610 501 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 OR4D1Q15615 310 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 RBBP7Q16576 425 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 ZXDCQ2QGD7 858 aaPredicted RBP9.48□□□□□ -0.89
CPSF4-213ENST00000484112 FRMPD2BQ6IN97 320 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 EMBQ6PCB8 327 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 LRRC70Q7Z2Q7 622 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 METTL27Q8N6F8 245 aaPredicted RBP9.48□□□□□ -0.89
CPSF4-213ENST00000484112 MFSD9Q8NBP5 474 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 LRRN4CLQ8ND94 238 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 TTLQ8NG68 377 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 OR1N1Q8NGS0 311 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 ACMSDQ8TDX5 336 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 UBTD2Q8WUN7 234 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.48□□□□□ -0.89
CPSF4-213ENST00000484112 TM4SF19Q96DZ7 209 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 TSNARE1Q96NA8 513 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 OR4K3Q96R72 315 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 ATOH8Q96SQ7 321 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 AIF1LQ9BQI0 150 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 LHPPQ9H008 270 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 NT5DC2Q9H857 520 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 ANKZF1Q9H8Y5 726 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 OLAHQ9NV23 265 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 WWOXQ9NZC7 414 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 PSMC3IPQ9P2W1 217 aaPredicted RBP9.48□□□□□ -0.89
CPSF4-213ENST00000484112 PTBP2Q9UKA9 531 aaKnown RBP9.48□□□□□ -0.89
CPSF4-213ENST00000484112 SLC22A14Q9Y267 594 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 TNPO3Q9Y5L0 923 aaKnown RBP9.48□□□□□ -0.89
CPSF4-213ENST00000484112 SEC16AO15027 2179 aa9.48□□□□□ -0.89
CPSF4-213ENST00000484112 ITPR2Q14571 2701 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 LOC105369274A0A096LPK9 316 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 LOC102723532A0A0G2JNH3 316 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 URADA6NGE7 173 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 POC1B-GALNT4F8VUJ3 575 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 H0YIG0 161 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 KLK8O60259 260 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 H2AFYO75367 372 aaKnown RBP9.47□□□□□ -0.89
CPSF4-213ENST00000484112 WDR47O94967 919 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 CYC1P08574 325 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 STSP08842 583 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 FAM153BP0C7A2 387 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 SLC35G6P0C7Q6 338 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 CDH1P12830 882 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 ITGAXP20702 1163 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 PIK3CGP48736 1102 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 YBX1P67809 324 aaKnown RBP9.47□□□□□ -0.89
CPSF4-213ENST00000484112 LAPTM5Q13571 262 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 BMPR2Q13873 1038 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 E2F2Q14209 437 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 SLC29A2Q14542 456 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 TBCCQ15814 346 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 NKG7Q16617 165 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 TUBB8Q3ZCM7 444 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 FAM153CQ494X1 144 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 ATG9BQ674R7 924 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 B3GNTL1Q67FW5 361 aaPredicted RBP9.47□□□□□ -0.89
CPSF4-213ENST00000484112 NXPE4Q6UWF7 544 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 KIRREL2Q6UWL6 708 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 IGFL2Q6UWQ7 119 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 ISLR2Q6UXK2 745 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 OVCH1Q7RTY7 1134 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 ASPGQ86U10 573 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 TDRPQ86YL5 185 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 CENPLQ8N0S6 344 aaPredicted RBP9.47□□□□□ -0.89
CPSF4-213ENST00000484112 OR4N4Q8N0Y3 316 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 KRT78Q8N1N4 520 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 ARHGEF39Q8N4T4 335 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 BCORP1Q8N888 145 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 TRPV3Q8NET8 790 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 NEIL2Q969S2 332 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 ALKBH8Q96BT7 664 aaKnown RBP9.47□□□□□ -0.89
CPSF4-213ENST00000484112 PYCR2Q96C36 320 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 NXNL1Q96CM4 212 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 MRRFQ96E11 262 aaKnown RBP9.47□□□□□ -0.89
CPSF4-213ENST00000484112 WDR34Q96EX3 536 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 VPS50Q96JG6 964 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 CD244Q9BZW8 370 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 DRC3Q9H069 523 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 ALG9Q9H6U8 611 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 CLK4Q9HAZ1 481 aaKnown RBP9.47□□□□□ -0.89
CPSF4-213ENST00000484112 ZNF304Q9HCX3 659 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 ABCF3Q9NUQ8 709 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 DNAJC11Q9NVH1 559 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 CD274Q9NZQ7 290 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 ZFP69BQ9UJL9 534 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 HS3ST3B1Q9Y662 390 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 SLC22A7Q9Y694 548 aa9.47□□□□□ -0.89
CPSF4-213ENST00000484112 TEP1Q99973 2627 aaKnown RBP9.46□□□□□ -0.89
CPSF4-213ENST00000484112 IGLV3-12A0A075B6K2 115 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 TRGV8A0A0C4DH27 118 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 TRIM49D1C9J1S8 452 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 MAP2K7O14733 419 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 CLGNO14967 610 aa9.46□□□□□ -0.9
CPSF4-213ENST00000484112 UGDHO60701 494 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms