RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 SUPT3HO75486 399 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 ACSL3O95573 720 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 C2P06681 752 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 PRR35P0CG20 571 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 ICAM2P13598 275 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 JAK1P23458 1154 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 ECHS1P30084 290 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 HPDP32754 393 aaPredicted RBP11.22□□□□□ -0.61
HMGN1-213ENST00000482192 GMPRP36959 345 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 AGTR2P50052 363 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 SERPINB8P50452 374 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 EFNA3P52797 238 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 STXBP1P61764 594 aaKnown RBP11.22□□□□□ -0.61
HMGN1-213ENST00000482192 HYAL2Q12891 473 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 DLG1Q12959 904 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 PCOLCEQ15113 449 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 INPP5JQ15735 1006 aaPredicted RBP11.22□□□□□ -0.61
HMGN1-213ENST00000482192 FAM83EQ2M2I3 478 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 XKR6Q5GH73 641 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 CRB2Q5IJ48 1285 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 IGFL2Q6UWQ7 119 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 ISLR2Q6UXK2 745 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 RIPOR1Q6ZS17 1223 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 Q6ZS92 163 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 LRRC70Q7Z2Q7 622 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.22□□□□□ -0.61
HMGN1-213ENST00000482192 IQCKQ8N0W5 287 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 OR5T3Q8NGG3 340 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 CREB3L4Q8TEY5 395 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 PPP4R1Q8TF05 950 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 TBC1D20Q96BZ9 403 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 PTCD3Q96EY7 689 aaKnown RBP11.22□□□□□ -0.61
HMGN1-213ENST00000482192 PEX11GQ96HA9 241 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 WDR77Q9BQA1 342 aaPredicted RBP11.22□□□□□ -0.61
HMGN1-213ENST00000482192 TUBB6Q9BUF5 446 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 CD244Q9BZW8 370 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 NT5DC2Q9H857 520 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 SNX15Q9NRS6 342 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 VPS4AQ9UN37 437 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 HEATR5BQ9P2D3 2071 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 TNRC6AQ8NDV7 1962 aaKnown RBP11.21□□□□□ -0.61
HMGN1-213ENST00000482192 HELZ2Q9BYK8 2649 aaKnown RBP11.21□□□□□ -0.61
HMGN1-213ENST00000482192 A0A096LPK6 155 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 CHST10O43529 356 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 CCNT2O60583 730 aaKnown RBP11.21□□□□□ -0.61
HMGN1-213ENST00000482192 FHP07954 510 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 INHBAP08476 426 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 TYK2P29597 1187 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 HNF4AP41235 474 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 KCNC1P48547 511 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 RAB8AP61006 207 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 OLR1P78380 273 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 IRF9Q00978 393 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 MFAP5Q13361 173 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 ABRAXAS2Q15018 415 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 NSDHLQ15738 373 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 PLEKHN1Q494U1 663 aaPredicted RBP11.21□□□□□ -0.61
HMGN1-213ENST00000482192 FBXO48Q5FWF7 155 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 PAGE2BQ5JRK9 111 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 TOR1AIP1Q5JTV8 583 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 UBAP2Q5T6F2 1119 aaKnown RBP11.21□□□□□ -0.61
HMGN1-213ENST00000482192 KLC3Q6P597 504 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 LINC00696Q6ZRV3 163 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 TAOK1Q7L7X3 1001 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 CPEB2Q7Z5Q1 589 aaKnown RBP11.21□□□□□ -0.61
HMGN1-213ENST00000482192 ANKRD37Q7Z713 158 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 CENPLQ8N0S6 344 aaPredicted RBP11.21□□□□□ -0.61
HMGN1-213ENST00000482192 SHISA5Q8N114 240 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 RHEBL1Q8TAI7 183 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 UBTD2Q8WUN7 234 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 KCTD4Q8WVF5 259 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 SLC44A1Q8WWI5 657 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 ESAMQ96AP7 390 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 NXNL1Q96CM4 212 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 WDR34Q96EX3 536 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 IMMP1LQ96LU5 166 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 LMF1Q96S06 567 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 ATOH8Q96SQ7 321 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 EFCAB11Q9BUY7 163 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 RBCK1Q9BYM8 510 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 LANCL2Q9NS86 450 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 IKBKGQ9Y6K9 419 aa11.21□□□□□ -0.61
HMGN1-213ENST00000482192 SEC16AO15027 2179 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 MDC1Q14676 2089 aaKnown RBP11.2□□□□□ -0.62
HMGN1-213ENST00000482192 A0A088AWK7 358 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 LRIT2A6NDA9 550 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 ANKDD1BA6NHY2 528 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 MAGEB17A8MXT2 336 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 UBXN8O00124 270 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 CLEC3AO75596 197 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 CDC123O75794 336 aaPredicted RBP11.2□□□□□ -0.62
HMGN1-213ENST00000482192 WFS1O76024 890 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 SEC24DO94855 1032 aaPredicted RBP11.2□□□□□ -0.62
HMGN1-213ENST00000482192 KLHL2O95198 593 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 B3GALT4O96024 378 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 ALDOAP04075 364 aaKnown RBP11.2□□□□□ -0.62
HMGN1-213ENST00000482192 UQCRHP07919 91 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 SMIM10L1P0DMW3 83 aa11.2□□□□□ -0.62
HMGN1-213ENST00000482192 ZNF10P21506 573 aaPredicted RBP11.2□□□□□ -0.62
HMGN1-213ENST00000482192 GLRBP48167 497 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms