RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 FKBP1BP68106 108 aa4.87□□□□□ -1.63
SF3B1-210ENST00000482158 RPP38P78345 283 aaKnown RBP4.87□□□□□ -1.63
SF3B1-210ENST00000482158 HLA-BQ31612 363 aa4.87□□□□□ -1.63
SF3B1-210ENST00000482158 TMEM270Q6UE05 265 aa4.87□□□□□ -1.63
SF3B1-210ENST00000482158 WDSUB1Q8N9V3 476 aa4.87□□□□□ -1.63
SF3B1-210ENST00000482158 CASP10Q92851 521 aa4.87□□□□□ -1.63
SF3B1-210ENST00000482158 EPSTI1Q96J88 318 aa4.87□□□□□ -1.63
SF3B1-210ENST00000482158 KRT12Q99456 494 aa4.87□□□□□ -1.63
SF3B1-210ENST00000482158 RPF1Q9H9Y2 349 aaKnown RBP4.87□□□□□ -1.63
SF3B1-210ENST00000482158 ASIC3Q9UHC3 531 aa4.87□□□□□ -1.63
SF3B1-210ENST00000482158 TMED7Q9Y3B3 224 aa4.87□□□□□ -1.63
SF3B1-210ENST00000482158 SELENOKQ9Y6D0 94 aa4.87□□□□□ -1.63
SF3B1-210ENST00000482158 A0A087X0K7 114 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 ZNF732B4DXR9 585 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 TLX2O43763 284 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-210ENST00000482158 CEACAM4O75871 244 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 DUS4LO95620 317 aaKnown RBP4.86□□□□□ -1.63
SF3B1-210ENST00000482158 IGHEP01854 428 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 ZSCAN5DPP0CG00 497 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 MYOGP15173 224 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 BTG1P62324 171 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 IRX4P78413 519 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 MORF4L2Q15014 288 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 MRGPRG-AS1Q2M3A8 158 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 ARMCX4Q5H9R4 360 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 AGAP6Q5VW22 663 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 TRMT11Q7Z4G4 463 aaKnown RBP4.86□□□□□ -1.63
SF3B1-210ENST00000482158 CCDC91Q7Z6B0 441 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 SNX32Q86XE0 403 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 TEX26Q8N6G2 289 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 ZNF248Q8NDW4 579 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 SLCO2A1Q92959 643 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 CDKN2AIPNLQ96HQ2 116 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 LURAP1Q96LR2 239 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 OVOL2Q9BRP0 275 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 HOXD1Q9GZZ0 328 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 POLKQ9UBT6 870 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 SATB2Q9UPW6 733 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 NCKAP1Q9Y2A7 1128 aa4.86□□□□□ -1.63
SF3B1-210ENST00000482158 MEX3AA1L020 520 aaKnown RBP4.85□□□□□ -1.63
SF3B1-210ENST00000482158 SRRM4A7MD48 611 aaKnown RBP4.85□□□□□ -1.63
SF3B1-210ENST00000482158 SLC1A7O00341 560 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 LRCH4O75427 683 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 RAD51DO75771 328 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 NXPH2O95156 264 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 EDNRAP25101 427 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 KRTAP10-9P60411 292 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 PPA1Q15181 289 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 FAM106AQ4KMX7 169 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 FGD3Q5JSP0 725 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 ATP1A1-AS1Q5TC04 95 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 C15orf52Q6ZUT6 534 aaKnown RBP4.85□□□□□ -1.63
SF3B1-210ENST00000482158 ASPGQ86U10 573 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 ZNF614Q8N883 585 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 SMYD1Q8NB12 490 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 OR5T2Q8NGG2 359 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 HCAR2Q8TDS4 363 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 BCL2L2Q92843 193 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-210ENST00000482158 RFT1Q96AA3 541 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 OMA1Q96E52 524 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 SYT15Q9BQS2 421 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 IDI2Q9BXS1 227 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 CUEDC2Q9H467 287 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 DPEP2Q9H4A9 486 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 FNDC4Q9H6D8 234 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-210ENST00000482158 TMOD3Q9NYL9 352 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 CSNK1G3Q9Y6M4 447 aa4.85□□□□□ -1.63
SF3B1-210ENST00000482158 C13orf42A0A1B0GVH6 325 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 GTPBP10A4D1E9 387 aaKnown RBP4.84□□□□□ -1.63
SF3B1-210ENST00000482158 SERINC4A6NH21 518 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 AKAP3O75969 853 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 RGS19P49795 217 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 CLCN4P51793 760 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 NME5P56597 212 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 GRB14Q14449 540 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 LRRC37A5PQ49AS3 106 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 OTUD3Q5T2D3 398 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-210ENST00000482158 ZC2HC1BQ5TFG8 222 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 LRRC38Q5VT99 294 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 PRAMEF8Q5VWM4 474 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 C10orf53Q8N6V4 93 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 TMEM99Q8N816 258 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 ZNF519Q8TB69 540 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 AP2M1Q96CW1 435 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 PDLIM5Q96HC4 596 aaKnown RBP4.84□□□□□ -1.63
SF3B1-210ENST00000482158 IL12RB2Q99665 862 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 DGCR6LQ9BY27 220 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 OSBPL8Q9BZF1 889 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 NACAP1Q9BZK3 213 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 SLC5A7Q9GZV3 580 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 RNPEPL1Q9HAU8 725 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 SPHK2Q9NRA0 654 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 MIS18AQ9NYP9 233 aa4.84□□□□□ -1.63
SF3B1-210ENST00000482158 EXOGQ9Y2C4 368 aaKnown RBP4.84□□□□□ -1.63
SF3B1-210ENST00000482158 A0A1W2PRV1 198 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 MAGEB16A2A368 324 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 MPTX1A8MV57 137 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 G3V2L1 256 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 SURF4O15260 269 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 KINO60870 393 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms