RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 TIA1P31483 386 aaKnown RBP eCLIP4.19□□□□□ -1.74
CALD1-219ENST00000480638 GPR183P32249 361 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 CAPGP40121 348 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 GP5P40197 560 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 NDST2P52849 883 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 COX10Q12887 443 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 ZNF542PQ5EBM4 170 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 SPECC1Q5M775 1068 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 SPANXN4Q5MJ08 99 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 COX8CQ7Z4L0 72 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 ABHD12Q8N2K0 398 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 NME8Q8N427 588 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 TEX26Q8N6G2 289 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 OR52B6Q8NGF0 335 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 OR2L2Q8NH16 312 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 NPRL2Q8WTW4 380 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 RIT1Q92963 219 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 FOXN4Q96NZ1 517 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 GBP5Q96PP8 586 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 UBQLN3Q9H347 655 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 TUBB1Q9H4B7 451 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 C10orf88Q9H8K7 445 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 ZHX2Q9Y6X8 837 aa4.19□□□□□ -1.74
CALD1-219ENST00000480638 RNF103O00237 685 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 TRAFD1O14545 582 aaPredicted RBP4.18□□□□□ -1.74
CALD1-219ENST00000480638 PGRMC2O15173 223 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 LRCH4O75427 683 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 POP4O95707 220 aaKnown RBP4.18□□□□□ -1.74
CALD1-219ENST00000480638 MT-ND2P03891 347 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 RPN1P04843 607 aaKnown RBP4.18□□□□□ -1.74
CALD1-219ENST00000480638 ETV5P41161 510 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 OR3A3P47888 321 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 PGFP49763 221 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 KIAA0141Q14154 515 aaPredicted RBP4.18□□□□□ -1.74
CALD1-219ENST00000480638 ZNF770Q6IQ21 691 aaPredicted RBP4.18□□□□□ -1.74
CALD1-219ENST00000480638 MACC1Q6ZN28 852 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 TRMT11Q7Z4G4 463 aaKnown RBP4.18□□□□□ -1.74
CALD1-219ENST00000480638 PHLDB2Q86SQ0 1253 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 METTL23Q86XA0 190 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 CDC20BQ86Y33 519 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 DND1Q8IYX4 353 aaKnown RBP4.18□□□□□ -1.74
CALD1-219ENST00000480638 POM121L12Q8N7R1 296 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 OR9Q2Q8NGE9 314 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 EXOC4Q96A65 974 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 C5orf66Q9H5L9 145 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 RPF1Q9H9Y2 349 aaKnown RBP4.18□□□□□ -1.74
CALD1-219ENST00000480638 GNB4Q9HAV0 340 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 KLK11Q9UBX7 282 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 NOCTQ9UK39 431 aaKnown RBP4.18□□□□□ -1.74
CALD1-219ENST00000480638 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.18□□□□□ -1.74
CALD1-219ENST00000480638 PLCL2Q9UPR0 1127 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 SATB2Q9UPW6 733 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 SPATA31D1Q6ZQQ2 1576 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 RNF123Q5XPI4 1314 aa4.18□□□□□ -1.74
CALD1-219ENST00000480638 IGLV4-3A0A075B6K6 122 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 TRAV34A0A0B4J273 112 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 ACOD1A6NK06 481 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 MTRF1O75570 445 aaKnown RBP4.17□□□□□ -1.74
CALD1-219ENST00000480638 ANKRD34CP0C6C1 535 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 TSPY3P0CV98 308 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 TSPY8P0CW00 308 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 DLATP10515 647 aaKnown RBP4.17□□□□□ -1.74
CALD1-219ENST00000480638 IFNAR1P17181 557 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 GIFP27352 417 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 CLCN4P51793 760 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 BTG1P62324 171 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 TSPY1Q01534 308 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 CD300CQ08708 224 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 GRB14Q14449 540 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 UPP1Q16831 310 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 KLHL10Q6JEL2 608 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 CAVIN1Q6NZI2 390 aaKnown RBP4.17□□□□□ -1.74
CALD1-219ENST00000480638 CDHR3Q6ZTQ4 885 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 DZIP1Q86YF9 867 aaKnown RBP4.17□□□□□ -1.74
CALD1-219ENST00000480638 ZC3H3Q8IXZ2 948 aaKnown RBP4.17□□□□□ -1.74
CALD1-219ENST00000480638 CCDC185Q8N715 623 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 OR5M9Q8NGP3 310 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 PDLIM5Q96HC4 596 aaKnown RBP4.17□□□□□ -1.74
CALD1-219ENST00000480638 ERO1AQ96HE7 468 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 ZNF597Q96LX8 424 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 TSSK2Q96PF2 358 aa4.17□□□□□ -1.74
CALD1-219ENST00000480638 IQCMA0A1B0GVH7 501 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 SELENOFO60613 162 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 HSPA4LO95757 839 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 SP9P0CG40 484 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 GOT1P17174 413 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 PKLRP30613 574 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 HOXC13P31276 330 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 ERVK-16P61578 105 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 FKBP3Q00688 224 aaKnown RBP4.16□□□□□ -1.74
CALD1-219ENST00000480638 RIGQ13278 110 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 PSMD6Q15008 389 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 ZNF146Q15072 292 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 TWISTNBQ3B726 338 aaPredicted RBP4.16□□□□□ -1.74
CALD1-219ENST00000480638 ZNF774Q6NX45 483 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 C15orf52Q6ZUT6 534 aaKnown RBP4.16□□□□□ -1.74
CALD1-219ENST00000480638 MEX3DQ86XN8 651 aaKnown RBP4.16□□□□□ -1.74
CALD1-219ENST00000480638 ERC1Q8IUD2 1116 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 CREBRFQ8IUR6 639 aa4.16□□□□□ -1.74
CALD1-219ENST00000480638 SPEM1Q8N4L4 309 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms