RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 PITHD1Q9GZP4 211 aaPredicted RBP12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 ELOVL6Q9H5J4 265 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 NT5DC2Q9H857 520 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 TNFRSF12AQ9NP84 129 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 LHX9Q9NQ69 397 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 CROTQ9UKG9 612 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 ZZEF1O43149 2961 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 ANKRD11Q6UB99 2663 aaPredicted RBP12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 LOC101059948A0A1B0GTJ6 334 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 LRIT2A6NDA9 550 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 MAGEB17A8MXT2 336 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 C4orf51C9J302 202 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 H0YIV9 168 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 ERI3O43414 337 aaKnown RBP12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 LYPLA1O75608 230 aaPredicted RBP12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 SERPINE1P05121 402 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 SERPINA6P08185 405 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 TCN2P20062 427 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 ITGAXP20702 1163 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 AGXTP21549 392 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 HMOX2P30519 316 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 ARRB2P32121 409 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 DLSTP36957 453 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 EIF2S3P41091 472 aaKnown RBP12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 STAT5AP42229 794 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 GCGRP47871 477 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 PLA2G16P53816 162 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 FOXA1P55317 472 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 RPS13P62277 151 aaKnown RBP12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 DCDP81605 110 aaKnown RBP12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 PCDH1Q08174 1060 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 IFT88Q13099 833 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 E2F2Q14209 437 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 NDUFA9Q16795 377 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 NKAIN1Q4KMZ8 207 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 FRG2Q64ET8 278 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 CLEC6AQ6EIG7 209 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 SCIMPQ6UWF3 145 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 DTX1Q86Y01 620 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 SHISA5Q8N114 240 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 METTL6Q8TCB7 284 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 NT5CQ8TCD5 201 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 ZNF473Q8WTR7 871 aaKnown RBP12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 CT55Q8WUE5 264 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 REPS1Q96D71 796 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 FRG2BQ96QU4 278 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 C17orf62Q9BQA9 187 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 REXO4Q9GZR2 422 aaKnown RBP12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 AICDAQ9GZX7 198 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 RHBGQ9H310 441 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 OR51B5Q9H339 312 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 ZNF395Q9H8N7 513 aaPredicted RBP12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 ANKHQ9HCJ1 492 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 IFT80Q9P2H3 777 aaPredicted RBP12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 DKK4Q9UBT3 224 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 TRPS1Q9UHF7 1281 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 ACSL6Q9UKU0 697 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 NAALAD2Q9Y3Q0 740 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 SCN2AQ99250 2005 aa12.8□□□□□ -0.36
SNRNP200-204ENST00000480615 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 TAF4O00268 1085 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 FOXS1O43638 330 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 RDH16O75452 317 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 CLEC3AO75596 197 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 ESRRBO95718 433 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 TBX6O95947 436 aaPredicted RBP12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 PDYNP01213 254 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 SERPINB3P29508 390 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 PKNOX1P55347 436 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 STXBP1P61764 594 aaKnown RBP12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 OLR1P78380 273 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 MAT1AQ00266 395 aaKnown RBP12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 BST1Q10588 318 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 SYT16Q17RD7 645 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 ARL13AQ5H913 290 aaPredicted RBP12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 ARHGAP40Q5TG30 622 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 GARNL3Q5VVW2 1013 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 SHISA6Q6ZSJ9 500 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 CUZD1Q86UP6 607 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 PDSS2Q86YH6 399 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 PRSS58Q8IYP2 241 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 ARHGEF39Q8N4T4 335 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 SNIP1Q8TAD8 396 aaKnown RBP12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 UTP15Q8TED0 518 aaKnown RBP12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 CNDP1Q96KN2 507 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 CNTNAP3BQ96NU0 1288 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 CNTNAP3Q9BZ76 1288 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 SLC6A16Q9GZN6 736 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 GPN2Q9H9Y4 310 aaPredicted RBP12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 ZNF304Q9HCX3 659 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 DMRT3Q9NQL9 472 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 HCN3Q9P1Z3 774 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 MRPS18BQ9Y676 258 aaKnown RBP12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 ACACBO00763 2458 aa12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 URB1O60287 2271 aaKnown RBP12.79□□□□□ -0.36
SNRNP200-204ENST00000480615 TMEM233B4DJY2 109 aa12.78□□□□□ -0.36
SNRNP200-204ENST00000480615 RTCAO00442 366 aaKnown RBP12.78□□□□□ -0.36
SNRNP200-204ENST00000480615 MANBAO00462 879 aa12.78□□□□□ -0.36
SNRNP200-204ENST00000480615 RRP8O43159 456 aaKnown RBP12.78□□□□□ -0.36
SNRNP200-204ENST00000480615 ITM2AO43736 263 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms