RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.28□□□□□ -0.76
ATG4B-219ENST00000479941 CCT6BQ92526 530 aa10.28□□□□□ -0.76
ATG4B-219ENST00000479941 REPS1Q96D71 796 aa10.28□□□□□ -0.76
ATG4B-219ENST00000479941 L3HYPDHQ96EM0 354 aa10.28□□□□□ -0.76
ATG4B-219ENST00000479941 NSUN5Q96P11 429 aaKnown RBP10.28□□□□□ -0.76
ATG4B-219ENST00000479941 TMEM237Q96Q45 408 aa10.28□□□□□ -0.76
ATG4B-219ENST00000479941 STMN4Q9H169 189 aaPredicted RBP10.28□□□□□ -0.76
ATG4B-219ENST00000479941 CENPHQ9H3R5 247 aa10.28□□□□□ -0.76
ATG4B-219ENST00000479941 SSU72Q9NP77 194 aaKnown RBP10.28□□□□□ -0.76
ATG4B-219ENST00000479941 SEMA4BQ9NPR2 832 aaPredicted RBP10.28□□□□□ -0.76
ATG4B-219ENST00000479941 OXSMQ9NWU1 459 aa10.28□□□□□ -0.76
ATG4B-219ENST00000479941 ZNF282Q9UDV7 671 aaPredicted RBP10.28□□□□□ -0.76
ATG4B-219ENST00000479941 STK38LQ9Y2H1 464 aa10.28□□□□□ -0.76
ATG4B-219ENST00000479941 MAP4K5Q9Y4K4 846 aa10.28□□□□□ -0.76
ATG4B-219ENST00000479941 PCDHGA11Q9Y5H2 935 aa10.28□□□□□ -0.76
ATG4B-219ENST00000479941 ACTL7BQ9Y614 415 aa10.28□□□□□ -0.76
ATG4B-219ENST00000479941 ATMQ13315 3056 aa10.28□□□□□ -0.76
ATG4B-219ENST00000479941 IGLV3-12A0A075B6K2 115 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 A0A088AWK7 358 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 LRIT2A6NDA9 550 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 GOLGA6L10A6NI86 522 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 VSTM2BA6NLU5 285 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 NKX2-8O15522 239 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 TYROBPO43914 113 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 GALR3O60755 368 aaPredicted RBP10.27□□□□□ -0.77
ATG4B-219ENST00000479941 SPAG7O75391 227 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 MLYCDO95822 493 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 ATXN8OSP0DMR3 200 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 SMIM10L1P0DMW3 83 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 PCNAP12004 261 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 IL1RNP18510 177 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 ZNF10P21506 573 aaPredicted RBP10.27□□□□□ -0.77
ATG4B-219ENST00000479941 FOLR3P41439 243 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 PIK3CBP42338 1070 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 CDH13P55290 713 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 DNAJB13P59910 316 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 RPS18P62269 152 aaKnown RBP10.27□□□□□ -0.77
ATG4B-219ENST00000479941 PHEXP78562 749 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 CLCQ05315 142 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 CDC20Q12834 499 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 TRAF3Q13114 568 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 SSPNQ14714 243 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 CASP8Q14790 479 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 RBBP7Q16576 425 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 CPSF6Q16630 551 aaKnown RBP eCLIP10.27□□□□□ -0.77
ATG4B-219ENST00000479941 UGT8Q16880 541 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 ADPRMQ3LIE5 342 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 GGTA1PQ4G0N0 100 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 UNC50Q53HI1 259 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 TNFAIP8L3Q5GJ75 292 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 C10orf62Q5T681 223 aaPredicted RBP10.27□□□□□ -0.77
ATG4B-219ENST00000479941 CHSY3Q70JA7 882 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 PRSS41Q7RTY9 318 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 VN1R5Q7Z5H4 357 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 MILR1Q7Z6M3 343 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 EXOC3L1Q86VI1 746 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 AMER3Q8N944 861 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 SRFBP1Q8NEF9 429 aaKnown RBP10.27□□□□□ -0.77
ATG4B-219ENST00000479941 ARMC2Q8NEN0 867 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 STT3BQ8TCJ2 826 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 TCP10LQ8TDR4 215 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 UTP15Q8TED0 518 aaKnown RBP10.27□□□□□ -0.77
ATG4B-219ENST00000479941 TRPC4APQ8TEL6 797 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 GAL3ST3Q96A11 431 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 NACC2Q96BF6 587 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 MIEF2Q96C03 454 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 CRELD1Q96HD1 420 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 SMIM10Q96HG1 83 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 FAR2Q96K12 515 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 CATSPER2Q96P56 530 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 FAM111AQ96PZ2 611 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 CDK15Q96Q40 435 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 SPSB2Q99619 263 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 YIPF2Q9BWQ6 316 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 TGIF2Q9GZN2 237 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 REXO4Q9GZR2 422 aaKnown RBP10.27□□□□□ -0.77
ATG4B-219ENST00000479941 C12orf65Q9H3J6 166 aaKnown RBP10.27□□□□□ -0.77
ATG4B-219ENST00000479941 CLK4Q9HAZ1 481 aaKnown RBP10.27□□□□□ -0.77
ATG4B-219ENST00000479941 PRM3Q9NNZ6 103 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 MKKSQ9NPJ1 570 aaPredicted RBP10.27□□□□□ -0.77
ATG4B-219ENST00000479941 C14orf105Q9NVL8 296 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 TRPC4Q9UBN4 977 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 RNF11Q9Y3C5 154 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 PTRH2Q9Y3E5 179 aaKnown RBP10.27□□□□□ -0.77
ATG4B-219ENST00000479941 NAALAD2Q9Y3Q0 740 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 IGSF10Q6WRI0 2623 aa10.27□□□□□ -0.77
ATG4B-219ENST00000479941 CACNA1GO43497 2377 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 CDC14CA4D256 554 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 SGK494L7N484 410 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 CNOT3O75175 753 aaKnown RBP10.26□□□□□ -0.77
ATG4B-219ENST00000479941 KLHL18O94889 574 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 TBX6O95947 436 aaPredicted RBP10.26□□□□□ -0.77
ATG4B-219ENST00000479941 ITGB2P05107 769 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 ZGLP1P0C6A0 271 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 ZNF888P0CJ79 500 aaPredicted RBP10.26□□□□□ -0.77
ATG4B-219ENST00000479941 CREB1P16220 341 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 IL10P22301 178 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 HNRNPH1P31943 449 aaKnown RBP10.26□□□□□ -0.77
ATG4B-219ENST00000479941 RAB8AP61006 207 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 SNRPNP63162 240 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms