RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 ACPPP15309 386 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 DRD4P21917 467 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 CLDN6P56747 220 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 TGM3Q08188 693 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 FAM53BQ14153 422 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 PUM1Q14671 1186 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 HKDC1Q2TB90 917 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 SPIN4Q56A73 249 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 SGO1Q5FBB7 561 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 OGFOD2Q6N063 350 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 GALNT18Q6P9A2 607 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 EPGNQ6UW88 154 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 ABHD13Q7L211 337 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 RAB11FIP2Q7L804 512 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 PPP1R3BQ86XI6 285 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 METTL4Q8N3J2 472 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 RNF175Q8N4F7 328 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 ACTRT2Q8TDY3 377 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 CCT6BQ92526 530 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 MTFMTQ96DP5 389 aaKnown RBP11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 MVB12AQ96EY5 273 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 SMIM10Q96HG1 83 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 FCRL1Q96LA6 429 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 PPP3R2Q96LZ3 170 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 C10orf90Q96M02 699 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 C3orf30Q96M34 536 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 KCNC2Q96PR1 638 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 TEFMQ96QE5 360 aaKnown RBP11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 OR6C1Q96RD1 312 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 ZPBPQ9BS86 351 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 DDA1Q9BW61 102 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 ZNF717Q9BY31 904 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 EPN3Q9H201 632 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 KLHL14Q9P2G3 628 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 SLC12A4Q9UP95 1085 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 TMED5Q9Y3A6 229 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 PCDHB3Q9Y5E6 796 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 PTGDR2Q9Y5Y4 395 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 A0A1W2PNU3 283 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 DCDC2BA2VCK2 349 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 C4orf51C9J302 202 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 PLPP1O14494 284 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 ERI3O43414 337 aaKnown RBP11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 TGFB1P01137 390 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 SERPIND1P05546 499 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 CTSBP07858 339 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 LINC00032P0C843 101 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 CCL4P13236 92 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 ALOX12P18054 663 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 SEC24CP53992 1094 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 ARSFP54793 590 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 AQP5P55064 265 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 SKP1P63208 163 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 HMGCS1Q01581 520 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 FOXM1Q08050 763 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 TBL3Q12788 808 aaKnown RBP11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 HERC3Q15034 1050 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 NR6A1Q15406 480 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 NDUFA9Q16795 377 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 IMPG1Q17R60 797 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 MUM1Q2TAK8 710 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 FAM214AQ32MH5 1076 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 TOR1AIP1Q5JTV8 583 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 RHBDD2Q6NTF9 364 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 TRIM40Q6P9F5 258 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 ABHD17CQ6PCB6 329 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 IGF2-ASQ6U949 168 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 SCIMPQ6UWF3 145 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 CEACAM20Q6UY09 585 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 LARP4Q71RC2 724 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 ZFAND4Q86XD8 727 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 KCT2Q8NC54 265 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 UTP15Q8TED0 518 aaKnown RBP11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 RGMAQ96B86 450 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 TBCDQ9BTW9 1192 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 ROGDIQ9GZN7 287 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 OR51B5Q9H339 312 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 CLK4Q9HAZ1 481 aaKnown RBP11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 KCNK13Q9HB14 408 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 LRTM1Q9HBL6 345 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 NPHS2Q9NP85 383 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 LHX9Q9NQ69 397 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 C1orf109Q9NX04 203 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 ASIC5Q9NY37 505 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 AHSPQ9NZD4 102 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 ADAM29Q9UKF5 820 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 PCDHGA8Q9Y5G5 932 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 PCDHGA3Q9Y5H0 932 aa11.93□□□□□ -0.5
TRAPPC12-218ENST00000479897 A0A088AWK7 358 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 HYKKA2RU49 373 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 POLR1CO15160 346 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 NSA2O95478 260 aaKnown RBP11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 EIF2S1P05198 315 aaKnown RBP11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 HBQ1P09105 142 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 ZNF10P21506 573 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 BSGP35613 385 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 RAP1GDS1P52306 607 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 TARDBPQ13148 414 aaKnown RBP eCLIP11.92□□□□□ -0.59e-9■■■■□ 24.6
TRAPPC12-218ENST00000479897 MAD2L1Q13257 205 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 KIAA0040Q15053 153 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms