RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894		A0A096LPK6	155 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894		A0A0J9YY10	115 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	VSTM2B	A6NLU5	285 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	MAP2K7	O14733	419 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	PRAMEF2	O60811	474 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	PSIP1	O75475	530 aa	Known RBP	14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	MLYCD	O95822	493 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	SHBG	P04278	402 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	LTA4H	P09960	611 aa	Known RBP	14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	CCDC166	P0CW27	439 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	ACPP	P15309	386 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	UGT2B7	P16662	529 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	AP1S2	P56377	157 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	KRTCAP3	Q53RY4	240 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	TTLL10	Q6ZVT0	673 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	COX15	Q7KZN9	410 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	SPPL2C	Q8IUH8	684 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	FAM20C	Q8IXL6	584 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	LILRA3	Q8N6C8	439 aa	Predicted RBP	14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	CFAP61	Q8NHU2	1237 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	GIMAP7	Q8NHV1	300 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	ATL1	Q8WXF7	558 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	NANOS1	Q8WY41	292 aa	Known RBP	14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	UBXN10	Q96LJ8	280 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	OR2A14	Q96R47	310 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	SOX17	Q9H6I2	414 aa	Predicted RBP	14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	ZNF160	Q9HCG1	818 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	DLL4	Q9NR61	685 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	CTNNAL1	Q9UBT7	734 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	LGALS13	Q9UHV8	139 aa		14.76	□□□□□ -0.05
HDLBP-238	ENST00000479894	SYCE1L	A8MT33	242 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	GFY	I3L273	518 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	DSCR3	O14972	297 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	C2	P06681	752 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	GSTA1	P08263	222 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	PRR35	P0CG20	571 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	H2AFX	P16104	143 aa	Predicted RBP	14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	CCT5	P48643	541 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	TIAL1	Q01085	375 aa	Known RBP eCLIP	14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	BMPR2	Q13873	1038 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	ARHGAP19	Q14CB8	494 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	ACAP2	Q15057	778 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	KRT71	Q3SY84	523 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	CDKL4	Q5MAI5	379 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	NAPRT	Q6XQN6	538 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	UBE2R2	Q712K3	238 aa	Predicted RBP	14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	TRIM73	Q86UV7	250 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	EID3	Q8N140	333 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	STAG3L4	Q8TBR4	150 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	BRIX1	Q8TDN6	353 aa	Known RBP	14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	CA5BP1	Q8WTZ4	195 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	SLC22A18	Q96BI1	424 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	CCDC138	Q96M89	665 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	VPS11	Q9H270	941 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	GSX1	Q9H4S2	264 aa	Predicted RBP	14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	VIPAS39	Q9H9C1	493 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	CAB39L	Q9H9S4	337 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	ENAM	Q9NRM1	1142 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	EURL	Q9NYK6	297 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	OR6C2	Q9NZP2	312 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	SPATA7	Q9P0W8	599 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	GALP	Q9UBC7	116 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	DCDC2	Q9UHG0	476 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	TMCO1	Q9UM00	188 aa		14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	RPH3A	Q9Y2J0	694 aa	Predicted RBP	14.75	□□□□□ -0.05
HDLBP-238	ENST00000479894	JMJD1C	Q15652	2540 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	UQCRHL	A0A096LP55	91 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	NSG1	A0A0A6YYJ2	146 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894		A0A1W2PQ72	361 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	SMIM23	A6NLE4	172 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	RGS16	O15492	202 aa	Predicted RBP	14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	PHGDH	O43175	533 aa	Known RBP	14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	KLHL2	O95198	593 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	BMP10	O95393	424 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	C1orf105	O95561	183 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	ALDOA	P04075	364 aa	Known RBP	14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	S100B	P04271	92 aa	Predicted RBP	14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	SERPINA7	P05543	415 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	UQCRH	P07919	91 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	F7	P08709	466 aa	Predicted RBP	14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	RBP1	P09455	135 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	SLC35E2B	P0CK96	405 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	GCA	P28676	217 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	MAGEA12	P43365	314 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	SLCO1A2	P46721	670 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	RAB28	P51157	221 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	FOLH1	Q04609	750 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	CASP8	Q14790	479 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	PCOLCE	Q15113	449 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	UBAP2	Q5T6F2	1119 aa	Known RBP	14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	ATG9B	Q674R7	924 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	CYHR1	Q6ZMK1	362 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	RIPOR1	Q6ZS17	1223 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	FRA10AC1	Q70Z53	315 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	VRK3	Q8IV63	474 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	TCAIM	Q8N3R3	496 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	GOLGA6L1	Q8N7Z2	621 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	OR9A1P	Q8NGU1	263 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	FLVCR1-AS1	Q8TAF5	88 aa		14.74	□□□□□ -0.05
HDLBP-238	ENST00000479894	ALKBH8	Q96BT7	664 aa	Known RBP	14.74	□□□□□ -0.05

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