RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 PHF11Q9UIL8 331 aa3.91□□□□□ -1.78
CMSS1-204ENST00000479555 MOSPD1Q9UJG1 213 aa3.91□□□□□ -1.78
CMSS1-204ENST00000479555 AGO2Q9UKV8 859 aaKnown RBP3.91□□□□□ -1.78
CMSS1-204ENST00000479555 TFR2Q9UP52 801 aa3.91□□□□□ -1.78
CMSS1-204ENST00000479555 PA2G4Q9UQ80 394 aaKnown RBP3.91□□□□□ -1.78
CMSS1-204ENST00000479555 TNFSF13BQ9Y275 285 aa3.91□□□□□ -1.78
CMSS1-204ENST00000479555 AP3M1Q9Y2T2 418 aa3.91□□□□□ -1.78
CMSS1-204ENST00000479555 SNX5Q9Y5X3 404 aa3.91□□□□□ -1.78
CMSS1-204ENST00000479555 MAU2Q9Y6X3 613 aa3.91□□□□□ -1.78
CMSS1-204ENST00000479555 MYH1P12882 1939 aa3.91□□□□□ -1.78
CMSS1-204ENST00000479555 ZNF335Q9H4Z2 1342 aaPredicted RBP3.91□□□□□ -1.78
CMSS1-204ENST00000479555 ROBO3Q96MS0 1386 aa3.9□□□□□ -1.78
CMSS1-204ENST00000479555 MYH2Q9UKX2 1941 aa3.9□□□□□ -1.78
CMSS1-204ENST00000479555 A0A1B0GUL6 1792 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 STRCP1A6NGW2 1772 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 A0A0B4J203 849 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 ZNF487B1APH4 448 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 MCIDASD6RGH6 385 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 LOC110117498-PIK3R3F6TDL0 507 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 GOLGA8SH3BPF8 625 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 CCRL2O00421 344 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 COPEO14579 308 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 HOXC11O43248 304 aaPredicted RBP3.9□□□□□ -1.79
CMSS1-204ENST00000479555 TADA2AO75478 443 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 BCAS2O75934 225 aaPredicted RBP3.9□□□□□ -1.79
CMSS1-204ENST00000479555 MFN2O95140 757 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 KAT7O95251 611 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 METTL18O95568 372 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 IGKV3-20P01619 116 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 HLA-DQA2P01906 255 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 APOC1P02654 83 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 SLC4A1P02730 911 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 SERPINB2P05120 415 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 POLBP06746 335 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 INHBAP08476 426 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 SNRPAP09012 282 aaKnown RBP3.9□□□□□ -1.79
CMSS1-204ENST00000479555 RFPL3SP0C7P2 107 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 UQCRFS1P1P0C7P4 283 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 TRIM49P0CI25 452 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 TRIM49CP0CI26 452 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 MBL2P11226 248 aaPredicted RBP3.9□□□□□ -1.79
CMSS1-204ENST00000479555 PEPDP12955 493 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 UCHL3P15374 230 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 HOXB9P17482 250 aaPredicted RBP3.9□□□□□ -1.79
CMSS1-204ENST00000479555 TFEBP19484 476 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 CYP3A5P20815 502 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 PON1P27169 355 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 RPA3P35244 121 aaPredicted RBP3.9□□□□□ -1.79
CMSS1-204ENST00000479555 HADHAP40939 763 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 PTPN9P43378 593 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 HAAOP46952 286 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 SOX2P48431 317 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 STARP49675 285 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 GDI2P50395 445 aaKnown RBP3.9□□□□□ -1.79
CMSS1-204ENST00000479555 SERPINB9P50453 376 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 HLCSP50747 726 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 ADPRHP54922 357 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 MFAP3P55082 362 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 DCDC1P59894 354 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 RAB4BP61018 213 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 RPP38P78345 283 aaKnown RBP3.9□□□□□ -1.79
CMSS1-204ENST00000479555 SHC2P98077 582 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 FLI1Q01543 452 aaPredicted RBP3.9□□□□□ -1.79
CMSS1-204ENST00000479555 GAD2Q05329 585 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.9□□□□□ -1.79
CMSS1-204ENST00000479555 STK11Q15831 433 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 MTHFSDQ2M296 383 aaKnown RBP3.9□□□□□ -1.79
CMSS1-204ENST00000479555 Q3ZCU0 254 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 LRRC24Q50LG9 513 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 ARMCX4Q5H9R4 360 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 CCNYL2Q5T2Q4 361 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 ASPHD1Q5U4P2 390 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 GFI1BQ5VTD9 330 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 AGAP6Q5VW22 663 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 LIPMQ5VYY2 423 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 SULT1C3Q6IMI6 304 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 ZNF773Q6PK81 442 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 FIP1L1Q6UN15 594 aaKnown RBP3.9□□□□□ -1.79
CMSS1-204ENST00000479555 ZNF704Q6ZNC4 412 aaPredicted RBP3.9□□□□□ -1.79
CMSS1-204ENST00000479555 ZNF600Q6ZNG1 722 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 TRILQ7L0X0 811 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 PRSS48Q7RTY5 328 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 RHPN2Q8IUC4 686 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 CDH26Q8IXH8 852 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 LGI2Q8N0V4 545 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 PGAM4Q8N0Y7 254 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 AADATQ8N5Z0 425 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 ARL14EPQ8N8R7 260 aaPredicted RBP3.9□□□□□ -1.79
CMSS1-204ENST00000479555 PRELID2Q8N945 189 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 ANKFN1Q8N957 763 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 BANPQ8N9N5 519 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 FNDC5Q8NAU1 212 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 IL17REQ8NFR9 667 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 TTLQ8NG68 377 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 OR7A2PQ8NGA2 310 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 OR13F1Q8NGS4 319 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 VANGL1Q8TAA9 524 aaPredicted RBP3.9□□□□□ -1.79
CMSS1-204ENST00000479555 LMO3Q8TAP4 145 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 SPATA18Q8TC71 538 aa3.9□□□□□ -1.79
CMSS1-204ENST00000479555 FANK1Q8TC84 345 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms