RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 IPCEF1Q8WWN9 437 aaPredicted RBP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 DNASE1L2Q92874 299 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 C3orf30Q96M34 536 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 MUS81Q96NY9 551 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 TRMT61BQ9BVS5 477 aaKnown RBP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 C11orf16Q9NQ32 467 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 THUMPD1Q9NXG2 353 aaKnown RBP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 A0A1W2PRG6 482 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 H0YJX3 145 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 KMOO15229 486 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 IL7RP16871 459 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 GPX3P22352 226 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 MPIP34949 423 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 SLC15A1P46059 708 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 HSF2Q03933 536 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 TARDBPQ13148 414 aaKnown RBP eCLIP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 PPP2R2DQ66LE6 453 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 CEACAM20Q6UY09 585 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 ERN2Q76MJ5 926 aaKnown RBP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 SIPA1Q96FS4 1042 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 SOX17Q9H6I2 414 aaPredicted RBP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 ZDHHC4Q9NPG8 344 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 NFKBIL1Q9UBC1 381 aaPredicted RBP13.85□□□□□ -0.19
COL20A1-206ENST00000479501 KCNK6Q9Y257 313 aa13.85□□□□□ -0.19
COL20A1-206ENST00000479501 SH3PXD2BA1X283 911 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 FAM86C2PA6NEL3 165 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 GPR39O43194 453 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 C6orf47O95873 294 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 KHKP50053 298 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 E2F2Q14209 437 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 DHCR24Q15392 516 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 MEP1AQ16819 746 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 C10orf62Q5T681 223 aaPredicted RBP13.84□□□□□ -0.19
COL20A1-206ENST00000479501 ENPP7Q6UWV6 458 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 RNF44Q7L0R7 432 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 ANKFN1Q8N957 763 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 RDH12Q96NR8 316 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 PKP4Q99569 1192 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 TM9SF3Q9HD45 589 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 ST14Q9Y5Y6 855 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 EIF3FO00303 357 aaPredicted RBP13.84□□□□□ -0.19
COL20A1-206ENST00000479501 RLN1P04808 185 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 HIST1H2ABP04908 130 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 SAGP10523 405 aaPredicted RBP13.84□□□□□ -0.19
COL20A1-206ENST00000479501 IFI30P13284 250 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 ARF5P84085 180 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 KCNAB2Q13303 367 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 SLC14A2Q15849 920 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 USP30Q70CQ3 517 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 HIST3H2AQ7L7L0 130 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 C12orf76Q8N812 135 aaPredicted RBP13.84□□□□□ -0.19
COL20A1-206ENST00000479501 NFKBIDQ8NI38 313 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 HIST1H2ACQ93077 130 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 KCNC2Q96PR1 638 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 REEP4Q9H6H4 257 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 S100A6P06703 90 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 C1GALT1C1LP0DN25 315 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 HSD3B1P14060 373 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 HSD3B2P26439 372 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 ELAVL3Q14576 367 aaKnown RBP13.84□□□□□ -0.19
COL20A1-206ENST00000479501 ZNF630Q2M218 657 aaPredicted RBP13.84□□□□□ -0.19
COL20A1-206ENST00000479501 VMACQ2NL98 169 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 PAGE3Q5JUK9 113 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 MPP7Q5T2T1 576 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 RTN4RL1Q86UN2 441 aaPredicted RBP13.84□□□□□ -0.19
COL20A1-206ENST00000479501 LSMEM2Q8N112 164 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 FAM110BQ8TC76 370 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 SLC22A18Q96BI1 424 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 RHBDF1Q96CC6 855 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 TRMT2BQ96GJ1 504 aaKnown RBP13.84□□□□□ -0.19
COL20A1-206ENST00000479501 TRNT1Q96Q11 434 aaKnown RBP13.84□□□□□ -0.19
COL20A1-206ENST00000479501 ANKRA2Q9H9E1 313 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 AKAP7Q9P0M2 348 aaPredicted RBP13.84□□□□□ -0.19
COL20A1-206ENST00000479501 PLAGL1Q9UM63 463 aa13.84□□□□□ -0.19
COL20A1-206ENST00000479501 FBP2O00757 339 aa13.83□□□□□ -0.19
COL20A1-206ENST00000479501 RASAL1O95294 804 aa13.83□□□□□ -0.19
COL20A1-206ENST00000479501 ITGBL1O95965 494 aaPredicted RBP13.83□□□□□ -0.19
COL20A1-206ENST00000479501 TGFBR2P37173 567 aa13.83□□□□□ -0.19
COL20A1-206ENST00000479501 FAM189BP81408 668 aa13.83□□□□□ -0.19
COL20A1-206ENST00000479501 CYBRD1Q53TN4 286 aa13.83□□□□□ -0.19
COL20A1-206ENST00000479501 TPRG1LQ5T0D9 272 aa13.83□□□□□ -0.19
COL20A1-206ENST00000479501 GPR26Q8NDV2 337 aa13.83□□□□□ -0.19
COL20A1-206ENST00000479501 YIPF4Q9BSR8 244 aa13.83□□□□□ -0.19
COL20A1-206ENST00000479501 SLC12A9Q9BXP2 914 aa13.83□□□□□ -0.19
COL20A1-206ENST00000479501 LINC00597Q9H2U6 94 aa13.83□□□□□ -0.19
COL20A1-206ENST00000479501 TMEM27Q9HBJ8 222 aa13.83□□□□□ -0.19
COL20A1-206ENST00000479501 IL23AQ9NPF7 189 aa13.83□□□□□ -0.19
COL20A1-206ENST00000479501 TVP23BQ9NYZ1 205 aa13.83□□□□□ -0.19
COL20A1-206ENST00000479501 ADAMTSL1Q8N6G6 1762 aa13.83□□□□□ -0.19
COL20A1-206ENST00000479501 GTPBP1O00178 669 aaKnown RBP13.83□□□□□ -0.2
COL20A1-206ENST00000479501 BCHEP06276 602 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 YES1P07947 543 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 C7P10643 843 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 KDELR2P33947 212 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 CPOXP36551 454 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 MAGEA8P43361 318 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 VEGFBP49765 207 aa13.83□□□□□ -0.2
COL20A1-206ENST00000479501 GRSF1Q12849 480 aaKnown RBP eCLIP13.83□□□□□ -0.2
COL20A1-206ENST00000479501 ZNF776Q68DI1 518 aaPredicted RBP13.83□□□□□ -0.2
COL20A1-206ENST00000479501 ZNF773Q6PK81 442 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms