RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 ERVPABLB-1P60509 514 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 PCK2Q16822 640 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 JAKMIP3Q5VZ66 844 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 ZNF600Q6ZNG1 722 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 BANPQ8N9N5 519 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 ZNF721Q8TF20 911 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 FAM120BQ96EK7 910 aaKnown RBP1.94□□□□□ -2.1
HPS3-205ENST00000478525 TNFRSF13CQ96RJ3 184 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 PAXXQ9BUH6 204 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 SCRT1Q9BWW7 348 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 ANKZF1Q9H8Y5 726 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 KCNK13Q9HB14 408 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 DNAJC4Q9NNZ3 241 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 GDE1Q9NZC3 331 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 THYN1Q9P016 225 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 ZNF215Q9UL58 517 aaPredicted RBP1.94□□□□□ -2.1
HPS3-205ENST00000478525 SPATA31D1Q6ZQQ2 1576 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 IL16Q14005 1332 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 TEX48A0A1B0GUV7 120 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 FSD2A1L4K1 749 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 C17orf105B2RV13 164 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 NPHP1O15259 732 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 MBD4O95243 580 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 DUTP33316 252 aaKnown RBP1.93□□□□□ -2.1
HPS3-205ENST00000478525 MDH2P40926 338 aaKnown RBP1.93□□□□□ -2.1
HPS3-205ENST00000478525 ASCL1P50553 236 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 PSMC6P62333 389 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 POLR2LP62875 67 aaKnown RBP1.93□□□□□ -2.1
HPS3-205ENST00000478525 MC1RQ01726 317 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 GSG1Q2KHT4 349 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 ARMCX5Q6P1M9 558 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 Q6P435 159 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 RFWD3Q6PCD5 774 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 NSUN4Q96CB9 384 aaKnown RBP1.93□□□□□ -2.1
HPS3-205ENST00000478525 ZNF830Q96NB3 372 aaPredicted RBP1.93□□□□□ -2.1
HPS3-205ENST00000478525 FEVQ99581 238 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 FNDC4Q9H6D8 234 aaPredicted RBP1.93□□□□□ -2.1
HPS3-205ENST00000478525 SYNCQ9H7C4 482 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 RNF121Q9H920 327 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 SP140LQ9H930 580 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 C3orf14Q9HBI5 128 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.93□□□□□ -2.1
HPS3-205ENST00000478525 PKD2L2Q9NZM6 624 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 TXNDC16Q9P2K2 825 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 ABCG2Q9UNQ0 655 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 CPQQ9Y646 472 aa1.93□□□□□ -2.1
HPS3-205ENST00000478525 ZNFX1Q9P2E3 1918 aaKnown RBP1.93□□□□□ -2.1
HPS3-205ENST00000478525 LATO43561 262 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 SCO2O43819 266 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 RECQL5O94762 991 aaPredicted RBP1.92□□□□□ -2.1
HPS3-205ENST00000478525 YES1P07947 543 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 ASNSP08243 561 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 P0C879 139 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 ADARP55265 1226 aaKnown RBP1.92□□□□□ -2.1
HPS3-205ENST00000478525 RALGDSQ12967 914 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 ECSCRQ19T08 205 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 ISXQ2M1V0 245 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 CCDC30Q5VVM6 783 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 Q6ZVQ6 151 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 Q7L0L9 218 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 C5orf24Q7Z6I8 188 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 FRAT1Q92837 279 aaPredicted RBP1.92□□□□□ -2.1
HPS3-205ENST00000478525 PTERQ96BW5 349 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 MUS81Q96NY9 551 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 ZBP1Q9H171 429 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 LIME1Q9H400 295 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 RIMS4Q9H426 269 aaPredicted RBP1.92□□□□□ -2.1
HPS3-205ENST00000478525 MGAT4AQ9UM21 535 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 MOKQ9UQ07 419 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 COLEC10Q9Y6Z7 277 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 NACAE9PAV3 2078 aa1.92□□□□□ -2.1
HPS3-205ENST00000478525 LOC390937A0A1W2PQ73 354 aa1.91□□□□□ -2.1
HPS3-205ENST00000478525 IGLON5A6NGN9 336 aa1.91□□□□□ -2.1
HPS3-205ENST00000478525 FOXI3A8MTJ6 420 aaPredicted RBP1.91□□□□□ -2.1
HPS3-205ENST00000478525 E2F3O00716 465 aa1.91□□□□□ -2.1
HPS3-205ENST00000478525 ENTPD3O75355 529 aa1.91□□□□□ -2.1
HPS3-205ENST00000478525 IGHG3P01860 377 aa1.91□□□□□ -2.1
HPS3-205ENST00000478525 FEN1P39748 380 aaKnown RBP1.91□□□□□ -2.1
HPS3-205ENST00000478525 TNFRSF4P43489 277 aa1.91□□□□□ -2.1
HPS3-205ENST00000478525 HMGCS2P54868 508 aa1.91□□□□□ -2.1
HPS3-205ENST00000478525 WNT4P56705 351 aa1.91□□□□□ -2.1
HPS3-205ENST00000478525 CLDN17P56750 224 aa1.91□□□□□ -2.1
HPS3-205ENST00000478525 CREB5Q02930 508 aa1.91□□□□□ -2.1
HPS3-205ENST00000478525 ILF2Q12905 390 aaKnown RBP1.91□□□□□ -2.1
HPS3-205ENST00000478525 BAATQ14032 418 aaPredicted RBP1.91□□□□□ -2.1
HPS3-205ENST00000478525 VWC2Q2TAL6 325 aa1.91□□□□□ -2.1
HPS3-205ENST00000478525 ALFQ53S48 1182 aa1.91□□□□□ -2.1
HPS3-205ENST00000478525 ZRANB3Q5FWF4 1079 aa1.91□□□□□ -2.1
HPS3-205ENST00000478525 Q8N9L7 120 aa1.91□□□□□ -2.1
HPS3-205ENST00000478525 TMCO6Q96DC7 493 aa1.91□□□□□ -2.1
HPS3-205ENST00000478525 OTUB1Q96FW1 271 aaPredicted RBP1.91□□□□□ -2.1
HPS3-205ENST00000478525 RBM41Q96IZ5 413 aaKnown RBP1.91□□□□□ -2.1
HPS3-205ENST00000478525 ALKBH3Q96Q83 286 aaPredicted RBP1.91□□□□□ -2.1
HPS3-205ENST00000478525 MRPL1Q9BYD6 325 aaKnown RBP1.91□□□□□ -2.1
HPS3-205ENST00000478525 NOL11Q9H8H0 719 aaKnown RBP1.91□□□□□ -2.1
HPS3-205ENST00000478525 DDX25Q9UHL0 483 aaKnown RBP1.91□□□□□ -2.1
HPS3-205ENST00000478525 SLC12A6Q9UHW9 1150 aa1.91□□□□□ -2.1
HPS3-205ENST00000478525 BCLAF3A2AJT9 711 aaKnown RBP1.9□□□□□ -2.11
HPS3-205ENST00000478525 ZNF487B1APH4 448 aa1.9□□□□□ -2.11
HPS3-205ENST00000478525 LRRTM2O43300 516 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms