RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 PLD5Q8N7P1 536 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 TDRD5Q8NAT2 981 aaKnown RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 SCCPDHQ8NBX0 429 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 AGBL3Q8NEM8 1001 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 SPATA4Q8NEY3 305 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 OR7G1Q8NGA0 311 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 OR13C2Q8NGS9 318 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ANGPTL6Q8NI99 470 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 FANK1Q8TC84 345 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 PDCD6IPQ8WUM4 868 aaKnown RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 UBLCP1Q8WVY7 318 aaPredicted RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 DYDC1Q8WWB3 177 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ST8SIA4Q92187 359 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 EXT2Q93063 718 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 RILPL2Q969X0 211 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 AZIN2Q96A70 460 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 CIDECQ96AQ7 238 aaPredicted RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 RHBDF1Q96CC6 855 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 C14orf79Q96F83 325 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ZNF274Q96GC6 653 aaPredicted RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 NSMCE2Q96MF7 247 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ZNF558Q96NG5 402 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 PANX2Q96RD6 677 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 PLIN2Q99541 437 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 RIT2Q99578 217 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 SLC29A1Q99808 456 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ASCL2Q99929 193 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 JPH2Q9BR39 696 aaPredicted RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 SYT17Q9BSW7 474 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 BBS2Q9BXC9 721 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 MRPL1Q9BYD6 325 aaKnown RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 NDEL1Q9GZM8 345 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ANKRD2Q9GZV1 360 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ABCG8Q9H221 673 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 SNX25Q9H3E2 840 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 GOLPH3LQ9H4A5 285 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ST6GALNAC4Q9H4F1 302 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 CHODLQ9H9P2 273 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ZDHHC18Q9NUE0 388 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 DDX28Q9NUL7 540 aaKnown RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 PRR34Q9NV39 138 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ARMC1Q9NVT9 282 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 HYPKQ9NX55 129 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 RAB20Q9NX57 234 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ARHGEF38Q9NXL2 777 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 MRPL39Q9NYK5 338 aaKnown RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 PKD2L2Q9NZM6 624 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 CTNNAL1Q9UBT7 734 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 DBF4Q9UBU7 674 aaPredicted RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 ERVK-11Q9UQG0 969 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 LIPT1Q9Y234 373 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 SLC22A14Q9Y267 594 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 HEY1Q9Y5J3 304 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 ZHX2Q9Y6X8 837 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 COL4A4P53420 1690 aaPredicted RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 ACEP12821 1306 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ADCY9O60503 1353 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 KIF24Q5T7B8 1368 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 CCDC144AA2RUR9 1427 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 WDR7Q9Y4E6 1490 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 A0A0G2JLW4 131 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 A0A0U1RQF3 1178 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 A0A1W2PN81 502 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 hCG_1809904A0A1W2PP81 198 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 A0A1W2PPE2 198 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 A0A1W2PR64 198 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 A0A1W2PRV1 198 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 TMEM120BA0PK00 339 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 ZNF716A6NP11 495 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 A8MX80 341 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 E9PI62 339 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 TRIM77I1YAP6 450 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 ACKR2O00590 384 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 GPR171O14626 319 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 ZNF197O14709 1029 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 SLC9A3R1O14745 358 aaPredicted RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 PSMA7O14818 248 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 AP5Z1O43299 807 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 ECE2O60344 883 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 SMIM24O75264 130 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 SUPT3HO75486 399 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 RHBDL1O75783 438 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 FAM155BO75949 473 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 CDK14O94921 469 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 LCA5LO95447 670 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 DIRAS3O95661 229 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 CRYZL1O95825 349 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 SCGB1D1O95968 90 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 CSTAP01040 98 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 LIPFP07098 398 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 CYC1P08574 325 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 CNPP09543 421 aaKnown RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 LINGO3P0C6S8 592 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 ZNF735P0CB33 412 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 MYBL1P10243 752 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 GHRP10912 638 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 ACADMP11310 421 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 LAMP2P13473 410 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 SLC2A4P14672 509 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms