RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 RBMXL3Q8N7X1 1067 aaKnown RBP9.66□□□□□ -0.86
CCM2-208ENST00000476594 SNX31Q8N9S9 440 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 PDPRQ8NCN5 879 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 ZNF740Q8NDX6 193 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 SRFBP1Q8NEF9 429 aaKnown RBP9.66□□□□□ -0.86
CCM2-208ENST00000476594 C7orf57Q8NEG2 295 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 SUN3Q8TAQ9 357 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 IFT81Q8WYA0 676 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 CCT6BQ92526 530 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 EXT2Q93063 718 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 GAL3ST3Q96A11 431 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 C8orf44Q96CB5 159 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 PTCD3Q96EY7 689 aaKnown RBP9.66□□□□□ -0.86
CCM2-208ENST00000476594 UBXN10Q96LJ8 280 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 LMF1Q96S06 567 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 LPAR4Q99677 370 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 ROGDIQ9GZN7 287 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 ZNF700Q9H0M5 742 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 ACSS3Q9H6R3 686 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 NT5DC2Q9H857 520 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 COPS7BQ9H9Q2 264 aaPredicted RBP9.66□□□□□ -0.86
CCM2-208ENST00000476594 ZDHHC18Q9NUE0 388 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 MRPS33Q9Y291 106 aaKnown RBP9.66□□□□□ -0.86
CCM2-208ENST00000476594 MRPS2Q9Y399 296 aaKnown RBP9.66□□□□□ -0.86
CCM2-208ENST00000476594 ANGPTL3Q9Y5C1 460 aa9.66□□□□□ -0.86
CCM2-208ENST00000476594 CCDC88CQ9P219 2028 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 PYCARD-AS1I3L0S3 204 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 FFAR3O14843 346 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 GPR42O15529 346 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 FHP07954 510 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 PRR35P0CG20 571 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 ZNF888P0CJ79 500 aaPredicted RBP9.65□□□□□ -0.86
CCM2-208ENST00000476594 RNH1P13489 461 aaKnown RBP9.65□□□□□ -0.86
CCM2-208ENST00000476594 TYK2P29597 1187 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 SERPINB1P30740 379 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 PIK3CGP48736 1102 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 TAS2R50P59544 299 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 PHEXP78562 749 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 IRF8Q02556 426 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 SLBPQ14493 270 aaKnown RBP eCLIP9.65□□□□□ -0.86
CCM2-208ENST00000476594 XKR6Q5GH73 641 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 LGSNQ5TDP6 509 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 TRIM40Q6P9F5 258 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 IGFL2Q6UWQ7 119 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 Q6ZS92 163 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 CPEB2Q7Z5Q1 589 aaKnown RBP9.65□□□□□ -0.86
CCM2-208ENST00000476594 LAPTM4BQ86VI4 370 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 SPNS2Q8IVW8 549 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 IFT20Q8IY31 132 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 AFAP1L2Q8N4X5 818 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 PLPP5Q8NEB5 264 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 RHEBL1Q8TAI7 183 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 DNAJB14Q8TBM8 379 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 TBC1D20Q96BZ9 403 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 PEX11GQ96HA9 241 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 CNDP1Q96KN2 507 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 MACROD1Q9BQ69 325 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 CENPKQ9BS16 269 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 UNKQ9C0B0 810 aaKnown RBP9.65□□□□□ -0.86
CCM2-208ENST00000476594 SLC6A16Q9GZN6 736 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 VN1R1Q9GZP7 353 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 ALG9Q9H6U8 611 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 NINJ2Q9NZG7 142 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 OPTCQ9UBM4 332 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 IKZF3Q9UKT9 509 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 TMCO1Q9UM00 188 aa9.65□□□□□ -0.86
CCM2-208ENST00000476594 NBASA2RRP1 2371 aa9.65□□□□□ -0.87
CCM2-208ENST00000476594 A0A087WUV0 522 aaPredicted RBP9.64□□□□□ -0.87
CCM2-208ENST00000476594 MAGEB17A8MXT2 336 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 K7EPI3 171 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 CLDN4O14493 209 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 CLEC3AO75596 197 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 WISP3O95389 354 aaPredicted RBP9.64□□□□□ -0.87
CCM2-208ENST00000476594 SLC35E2BP0CK96 405 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 GFAPP14136 432 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 EPB42P16452 691 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 MSH2P43246 934 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 TSFMP43897 325 aaKnown RBP9.64□□□□□ -0.87
CCM2-208ENST00000476594 GLRBP48167 497 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 HSPA7P48741 367 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 ZNF169Q14929 603 aaPredicted RBP9.64□□□□□ -0.87
CCM2-208ENST00000476594 ABRAXAS2Q15018 415 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 ACAP2Q15057 778 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 NSDHLQ15738 373 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 TBCCQ15814 346 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 IGFBP7Q16270 282 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 INAQ16352 499 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 ZXDCQ2QGD7 858 aaPredicted RBP9.64□□□□□ -0.87
CCM2-208ENST00000476594 TSNAXIP1Q2TAA8 658 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 BTBD16Q32M84 506 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 TOR1AIP1Q5JTV8 583 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 MROH9Q5TGP6 573 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 ABHD17BQ5VST6 288 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 PLAG1Q6DJT9 500 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 SLCO4C1Q6ZQN7 724 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 QSOX2Q6ZRP7 698 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 PRSS41Q7RTY9 318 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 CMC1Q7Z7K0 106 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 SPATA6LQ8N4H0 392 aa9.64□□□□□ -0.87
CCM2-208ENST00000476594 ANKRD53Q8N9V6 530 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms