RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 XKR3Q5GH77 459 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 EXOSC6Q5RKV6 272 aaKnown RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 ATXN7L2Q5T6C5 722 aaPredicted RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 CLEC6AQ6EIG7 209 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 MPZL3Q6UWV2 235 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 CD300LGQ6UXG3 332 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 MOB3CQ70IA8 216 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 FAM131BQ86XD5 332 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 CAMKK1Q8N5S9 505 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 C12orf29Q8N999 325 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 FAM71CQ8NEG0 241 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ACER1Q8TDN7 264 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 CMTM3Q96MX0 182 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 DPYSL5Q9BPU6 564 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 APOL4Q9BPW4 351 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 NTMT1Q9BV86 223 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 KATNB1Q9BVA0 655 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 SARS2Q9NP81 518 aaKnown RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 KLHL1Q9NR64 748 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 CREBZFQ9NS37 354 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 CYSLTR2Q9NS75 346 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 CUTCQ9NTM9 273 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 PIGVQ9NUD9 493 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ADA2Q9NZK5 511 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 TSR3Q9UJK0 312 aaKnown RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 POMT2Q9UKY4 750 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 PCOLCE2Q9UKZ9 415 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 MKI67P46013 3256 aaKnown RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 TMEM129A0AVI4 362 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 C5orf52A6NGY3 159 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 HMSDA8MTL9 139 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 AIPO00170 330 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 DOK2O60496 412 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 GMNNO75496 209 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 SLC22A3O75751 556 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 SNAPC5O75971 98 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ECDO95905 644 aaPredicted RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 S100A6P06703 90 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 PSKH1P11801 424 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 LCP1P13796 627 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 NPR1P16066 1061 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 PTPRAP18433 802 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 KELP23276 732 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 MAPK3P27361 379 aaPredicted RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 TRHRP34981 398 aaPredicted RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 NNMTP40261 264 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 SLC9A3P48764 834 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ST13P50502 369 aaKnown RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 PDX1P52945 283 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ERVPABLB-1P60509 514 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 RPP38P78345 283 aaKnown RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 NCF4Q15080 339 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 IMPG1Q17R60 797 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 CDKL4Q5MAI5 379 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ELFN2Q5R3F8 820 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 STRIP1Q5VSL9 837 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 PLAG1Q6DJT9 500 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 SUSD1Q6UWL2 747 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 SBSNQ6UWP8 590 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ANGPTL5Q86XS5 388 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ADGRF3Q8IZF5 1079 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 STK40Q8N2I9 435 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 MS4A15Q8N5U1 240 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 DTX3Q8N9I9 347 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 KDF1Q8NAX2 398 aaPredicted RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 ZBTB44Q8NCP5 570 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 CHURC1Q8WUH1 139 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 MALSU1Q96EH3 234 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 Q96MT0 163 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 FRMD6Q96NE9 622 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ARHGAP9Q9BRR9 750 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ACAT2Q9BWD1 397 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 KATNBL1Q9H079 304 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.94□□□□□ -1.78
USP16-205ENST00000474835 CDT1Q9H211 546 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 MMP28Q9H239 520 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 SPASTQ9UBP0 616 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 CTSFQ9UBX1 484 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ZBTB21Q9ULJ3 1066 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 LRP4O75096 1905 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 TRBV5-4A0A0C4DH59 114 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 C17orf113A0A1B0GUU1 675 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 FFAR1O14842 300 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 INPPL1O15357 1258 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 LANCL1O43813 399 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 RECQL5O94762 991 aaPredicted RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 OR5F1O95221 314 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 NFICP08651 508 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 STSP08842 583 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ACTR1BP42025 376 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 FRKP42685 505 aaPredicted RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 RNF144AP50876 292 aaPredicted RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 GTF2A2P52657 109 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ACTR1AP61163 376 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 DUOXA2Q1HG44 320 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 SYTL3Q4VX76 610 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 CTSL3PQ5NE16 218 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 PDZK1Q5T2W1 519 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 HECTD2Q5U5R9 776 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 SYPL2Q5VXT5 272 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms