RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 IL1RNP18510 177 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 F8A1P23610 371 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 HNRNPH1P31943 449 aaKnown RBP17.22■□□□□ 0.35
SNRPB-203ENST00000474384 PKNOX1P55347 436 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 RAB8AP61006 207 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 GGTA1PQ4G0N0 100 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 MLIPQ5VWP3 458 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 TTC19Q6DKK2 380 aaPredicted RBP17.22■□□□□ 0.35
SNRPB-203ENST00000474384 PRMT9Q6P2P2 845 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 LRRC69Q6ZNQ3 347 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 CDYL2Q8N8U2 506 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 WDR20Q8TBZ3 569 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 MGARPQ8TDB4 240 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 UTP15Q8TED0 518 aaKnown RBP17.22■□□□□ 0.35
SNRPB-203ENST00000474384 AGAP11Q8TF27 550 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 SREK1Q8WXA9 508 aaKnown RBP17.22■□□□□ 0.35
SNRPB-203ENST00000474384 COL26A1Q96A83 441 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 MMABQ96EY8 250 aaPredicted RBP17.22■□□□□ 0.35
SNRPB-203ENST00000474384 CNDP1Q96KN2 507 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 MAGEB10Q96LZ2 347 aaPredicted RBP17.22■□□□□ 0.35
SNRPB-203ENST00000474384 MTERF1Q99551 399 aaKnown RBP17.22■□□□□ 0.35
SNRPB-203ENST00000474384 PAIP2Q9BPZ3 127 aaKnown RBP17.22■□□□□ 0.35
SNRPB-203ENST00000474384 SHCBP1LQ9BZQ2 653 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 ACBD3Q9H3P7 528 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 GPN2Q9H9Y4 310 aaPredicted RBP17.22■□□□□ 0.35
SNRPB-203ENST00000474384 ZNF304Q9HCX3 659 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 SLC22A11Q9NSA0 550 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 IFT80Q9P2H3 777 aaPredicted RBP17.22■□□□□ 0.35
SNRPB-203ENST00000474384 TRPS1Q9UHF7 1281 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 ADGRE2Q9UHX3 823 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 ZMIZ1Q9ULJ6 1067 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 CDC14AQ9UNH5 594 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 TSC22D4Q9Y3Q8 395 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 SLC22A7Q9Y694 548 aa17.22■□□□□ 0.35
SNRPB-203ENST00000474384 SCN3AQ9NY46 2000 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 TPRP12270 2363 aaKnown RBP17.21■□□□□ 0.35
SNRPB-203ENST00000474384 URADA6NGE7 173 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 SGK494L7N484 410 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 BIRC5O15392 142 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 ESRRBO95718 433 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 TGFB1P01137 390 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 SMIM10L1P0DMW3 83 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 ALOX12P18054 663 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 ITPKBP27987 946 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 SERPINB1P30740 379 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 PIK3CBP42338 1070 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 AVPR1BP47901 424 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 SLC18A1P54219 525 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 WDR4P57081 412 aaKnown RBP17.21■□□□□ 0.35
SNRPB-203ENST00000474384 STXBP1P61764 594 aaKnown RBP17.21■□□□□ 0.35
SNRPB-203ENST00000474384 IFT88Q13099 833 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 DNASE1L3Q13609 305 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 DEFB134Q4QY38 66 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 SGO1Q5FBB7 561 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 ARHGAP40Q5TG30 622 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 HHATQ5VTY9 493 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 FRG2Q64ET8 278 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 FAM198BQ6UWH4 519 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 ABHD13Q7L211 337 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 PDSS2Q86YH6 399 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 AFAP1L2Q8N4X5 818 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 METTL6Q8TCB7 284 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 KIAA1143Q96AT1 154 aaPredicted RBP17.21■□□□□ 0.35
SNRPB-203ENST00000474384 MS4A6EQ96DS6 147 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 MVB12AQ96EY5 273 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 SMIM10Q96HG1 83 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 FRG2BQ96QU4 278 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 F2RL3Q96RI0 385 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 KCNA7Q96RP8 456 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 MS4A8Q9BY19 250 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 REXO4Q9GZR2 422 aaKnown RBP17.21■□□□□ 0.35
SNRPB-203ENST00000474384 ANKHQ9HCJ1 492 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 DMRT3Q9NQL9 472 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 IL17BQ9UHF5 180 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 GPN3Q9UHW5 284 aaPredicted RBP17.21■□□□□ 0.35
SNRPB-203ENST00000474384 NAALAD2Q9Y3Q0 740 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 ZZEF1O43149 2961 aa17.21■□□□□ 0.35
SNRPB-203ENST00000474384 A0A0G2JN53 185 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 MAGEB17A8MXT2 336 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 C4orf51C9J302 202 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 C9J4A7 227 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 TERTO14746 1132 aaKnown RBP17.2■□□□□ 0.34
SNRPB-203ENST00000474384 ERI3O43414 337 aaKnown RBP17.2■□□□□ 0.34
SNRPB-203ENST00000474384 NPHS1O60500 1241 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 NSA2O95478 260 aaKnown RBP17.2■□□□□ 0.34
SNRPB-203ENST00000474384 ONECUT2O95948 504 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 PIM1P11309 404 aaPredicted RBP17.2■□□□□ 0.34
SNRPB-203ENST00000474384 FBLP22087 321 aaKnown RBP17.2■□□□□ 0.34
SNRPB-203ENST00000474384 HPDP32754 393 aaPredicted RBP17.2■□□□□ 0.34
SNRPB-203ENST00000474384 RPS13P62277 151 aaKnown RBP17.2■□□□□ 0.34
SNRPB-203ENST00000474384 PHEXP78562 749 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 HERC3Q15034 1050 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 ADPRMQ3LIE5 342 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 TCHHL1Q5QJ38 904 aaPredicted RBP17.2■□□□□ 0.34
SNRPB-203ENST00000474384 COX15Q7KZN9 410 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 ENDOVQ8N8Q3 282 aaKnown RBP17.2■□□□□ 0.34
SNRPB-203ENST00000474384 GAL3ST3Q96A11 431 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 CMTM7Q96FZ5 175 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 CCNL2Q96S94 520 aaPredicted RBP17.2■□□□□ 0.34
SNRPB-203ENST00000474384 YIPF2Q9BWQ6 316 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms