RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 OLIG1Q8TAK6 271 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 CCDC12Q8WUD4 166 aaPredicted RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 NELFBQ8WX92 580 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 HSD17B8Q92506 261 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 ANP32BQ92688 251 aaKnown RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 RAD54LQ92698 747 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 SMARCE1Q969G3 411 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 DNAJC19Q96DA6 116 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 EEF2KMTQ96G04 330 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 TBATAQ96M53 351 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 C16orf45Q96MC5 204 aaPredicted RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 SDF4Q9BRK5 362 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 DESI2Q9BSY9 194 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 TRIM9Q9C026 710 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 CCSER1Q9C0I3 900 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 RAB6CQ9H0N0 254 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 SEMA6AQ9H2E6 1030 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 PIGMQ9H3S5 423 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 UNC45AQ9H3U1 944 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 VCPKMTQ9H867 229 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 BRF2Q9HAW0 419 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 C6orf50Q9HD87 102 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 UBN1Q9NPG3 1134 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 PCDHB16Q9NRJ7 776 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 OLFML3Q9NRN5 406 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 NDE1Q9NXR1 346 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 WRAP73Q9P2S5 460 aaPredicted RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 ADD3Q9UEY8 706 aaKnown RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 SEC63Q9UGP8 760 aaKnown RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 DDX25Q9UHL0 483 aaKnown RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 RWDD2AQ9UIY3 292 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 HACL1Q9UJ83 578 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 INTS6Q9UL03 887 aaKnown RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 SARDHQ9UL12 918 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 NAALADL1Q9UQQ1 740 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 MAU2Q9Y6X3 613 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 KNL1Q8NG31 2342 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 AKAP9Q99996 3911 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 CELSR3Q9NYQ7 3312 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 ITIH6Q6UXX5 1313 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 ADGRA3Q8IWK6 1321 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 IGSF9BQ9UPX0 1349 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 KDM3AQ9Y4C1 1321 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 COL4A6Q14031 1691 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 PLXNB3Q9ULL4 1909 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 A0A087WUV0 522 aaPredicted RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 TTC26A0AVF1 554 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 TMEM150BA6NC51 233 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 B4DLN1 442 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 DDX39AO00148 427 aaKnown RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 DNM1LO00429 736 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 LAD1O00515 517 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 CDX4O14627 284 aaPredicted RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF263O14978 683 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 ATP2A1O14983 1001 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 WDR46O15213 610 aaKnown RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 TNFSF14O43557 240 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 CHMP2AO43633 222 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 CNMDO75829 334 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 PSMD10O75832 226 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 CCNE2O96020 404 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 ICAM1P05362 532 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 ASNSP08243 561 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 GCFC2P16383 781 aaKnown RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 CYP11B2P19099 503 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 CCNE1P24864 410 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 RPS12P25398 132 aaKnown RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 EPHA8P29322 1005 aaPredicted RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 GNA11P29992 359 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 ICAM3P32942 547 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 RGS2P41220 211 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 PAFAH1B1P43034 410 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 CASP4P49662 377 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 CASP6P55212 293 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 UBASH3AP57075 661 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 PSMC6P62333 389 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 RPS6P62753 249 aaKnown RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 ASIC1P78348 528 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 NCBP1Q09161 790 aaKnown RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 VGLL4Q14135 290 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 COG2Q14746 738 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 SYCP1Q15431 976 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 ALFQ53S48 1182 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 C2orf83Q53S99 150 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 TCP11X2Q5H9J9 407 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 INTS11Q5TA45 600 aaKnown RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF658Q5TYW1 1059 aaPredicted RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 SPATA1Q5VX52 437 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 SPECC1LQ69YQ0 1117 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 CENPPQ6IPU0 288 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 WDR59Q6PJI9 974 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 MOXD1Q6UVY6 613 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF841Q6ZN19 808 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 MOB2Q70IA6 237 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 CCDC190Q86UF4 302 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 GPBP1Q86WP2 473 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 CATSPER3Q86XQ3 398 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 APOBEC3FQ8IUX4 373 aaKnown RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 LACC1Q8IV20 430 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 DAW1Q8N136 415 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms